Red clover Marker Database

RCS5576 Information

Marker name RCS5576
Marker category Red_clover_SSR
Primer sequences Fw CCAATCAACCAACACAACACA
Rv AATGGAAGTGAAATCCGTGG
EST/Genome sequences DE238555
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG6
Position 32.803
SNP Position
Method
SSR Fragment size 107
Pattern* AAAG
Repeat count 15
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5576
Enzyme
Related markers Marker name mte1-84h13
Species Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense