Red clover Marker Database

RCS5440 Information

Marker name RCS5440
Marker category Red_clover_SSR
Primer sequences Fw GATTCATGCACCCTAAACGG
Rv ATGAAGCGAAAAGGATGGTG
EST/Genome sequences BB914277
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG4
Position 71.117
SNP Position
Method
SSR Fragment size 255
Pattern* AAAT
Repeat count 20
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5440
Enzyme
Related markers Marker name AP010024, mth2-7m1
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense