Red clover Marker Database

RCS5208 Information

Marker name RCS5208
Marker category Red_clover_SSR
Primer sequences Fw TCCATCGTTTAAATCTCACGC
Rv ACGCGCTTTTTCAAAACACT
EST/Genome sequences BB912394
Lines
PIC Value 0.793118
Lines 48
Map
(HR x R130)
Linkage LG2
Position 17.225
SNP Position
Method
SSR Fragment size 190
Pattern* AG
Repeat count 27
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5208
Enzyme
Related markers Marker name AP007419, mth2-66m17
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense