Red clover Marker Database

RCS5188 Information

Marker name RCS5188
Marker category Red_clover_SSR
Primer sequences Fw GGCAAAGACCAATTTTCCAA
Rv GCCTATTCACCGGAATCTCA
EST/Genome sequences BB912262
Lines
PIC Value
Lines
Map HR x R130 Linkage LG4
Position 93.736
HR x R130 Linkage LG5
Position 40.058
SNP Position
Method
SSR Fragment size 128
Pattern* AGC
Repeat count 21
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5188
Enzyme
Related markers Marker name AP010178, mth2-135i19
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense