Red clover Marker Database

RCS4350 Information

Marker name RCS4350
Marker category Red_clover_SSR
Primer sequences Fw AACAATCTTGGAAAATTCATGTC
Rv TATGATGCTGGCTTCACCAA
EST/Genome sequences BB907029
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG4
Position 89.568
SNP Position
Method
SSR Fragment size 226
Pattern* AAAT
Repeat count 16
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS4350
Enzyme
Related markers Marker name "AP009813(a), AP009814(b), AP009815(c)", mth2-15l24
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense