Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES4312 Chr12 28782 1e-143
CaES4461 Chr12 29945 1e-149
CaES3035 Chr12 48756 1e-117
CaES2629 Chr12 63696 1e-115
CaES4583 Chr12 66500 1e-132
CaES3312 Chr12 72860 6e-92
CaES2265 0.0 192 Chr12 140477 1e-119
CaES2172 Chr12 269490 1e-138
CaES0073 Chr12 506449 1e-50
CaES5500 Chr12 790848 7e-79
CaES3994 Chr12 975298 1e-118
CaES0449 Chr12 987256 1e-89
CaES2480 Chr12 1047997 6e-51
CaES1691 Chr12 1552710 7e-37
CaES0226 Chr12 1645800 1e-108
CaES5355 Chr12 1661651 1e-100
CaES0667 Chr12 1672327 4e-67
CaES4669 Chr12 1701879 1e-116
CaES4926 Chr12 1724699 1e-140
CaES4795 Chr12 1939758 2e-84
CaES3955 Chr12 1942184 1e-121
CaES4261 Chr12 1991885 1e-110
CaES4469 Chr12 2098001 1e-142
CaES5546 Chr12 2210091 8e-56
CaES2542 Chr12 2215298 1e-111
CaES5116 Chr12 2230331 1e-80
CaES0277 Chr12 2309012 7e-90
CaES4872 Chr12 2466222 1e-100
CaES1237 Chr12 2622518 1e-128
CaES0657 Chr12 2666675 4e-89
CaES4730 Chr12 2715964 1e-127
CaES1564 Chr12 2786606 5e-40
CaES1810 Chr12 3061839 1e-83
CaES5222 Chr12 3332010 1e-76
CaES4442 Chr12 3403782 3e-83
CaES2290 Chr12 3461564 1e-100
CaES4818 Chr12 3549126 1e-113
CaES1895 Chr12 3600902 8e-36
CaES4539 Chr12 3652851 3e-92
CaES2145 Chr12 3711471 2e-81
CaES3306 Chr12 3739670 9e-80
CaES1566 Chr12 4010826 7e-43
CaES0876 Chr12 4017274 1e-59
CaES1789 Chr12 4107503 2e-86
CaES4248 Chr12 4121912 1e-157
CaES4217 Chr12 4218289 1e-149
CaES5458 Chr12 4242192 1e-22
CaES4617 Chr12 4456686 1e-124
CaES4289 Chr12 4470811 1e-119
CaES1690 Chr12 4503327 1e-103
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum