Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES4891 Chr12 4840180 3e-70
CaES4894 Chr12 56474490 1e-131
CaES4925 Chr12 184823307 1e-106
CaES4926 Chr12 1724699 1e-140
CaES4943 Chr12 143233766 1e-112
CaES4979 Chr12 13113891 6e-78
CaES4980 Chr12 221556895 3e-84
CaES4987 Chr12 30594381 1e-103
CaES4999 Chr12 213920506 2e-99
CaES5019 Chr12 228720673 8e-91
CaES5028 Chr12 12455419 3e-85
CaES5030 Chr12 148468234 1e-100
CaES5045 Chr12 224980603 1e-125
CaES5101 Chr12 26720602 1e-108
CaES5107 Chr12 58611454 1e-114
CaES5116 Chr12 2230331 1e-80
CaES5149 Chr12 40383873 3e-25
CaES5213 Chr12 61702150 1e-124
CaES5219 Chr12 57713394 5e-56
CaES5222 Chr12 3332010 1e-76
CaES5234 Chr12 9797729 4e-69
CaES5276 Chr12 229707719 1e-61
CaES5295 Chr12 97511707 1e-122
CaES5303 Chr12 226468283 7e-59
CaES5312 Chr12 42016287 1e-59
CaES5325 Chr12 26715378 1e-125
CaES5327 Chr12 81574094 1e-101
CaES5328 Chr12 58085435 1e-114
CaES5355 Chr12 1661651 1e-100
CaES5370 Chr12 83207176 4e-98
CaES5394 Chr12 219050271 9e-62
CaES5439 Chr12 148466413 2e-97
CaES5444 Chr12 29157312 5e-41
CaES5447 Chr12 32901040 2e-21
CaES5451 Chr12 199782078 8e-65
CaES5458 Chr12 4242192 1e-22
CaES5473 Chr12 20827813 9e-66
CaES5479 Chr12 40981669 8e-56
CaES5500 Chr12 790848 7e-79
CaES5520 Chr12 227307521 9e-70
CaES5522 Chr12 225601698 1e-123
CaES5529 Chr12 226533086 1e-102
CaES5532 Chr12 106426644 2e-45
CaES5546 Chr12 2210091 8e-56
CaES5561 Chr12 142102080 3e-77
CaES5641 Chr12 229927024 1e-102
CaES5650 Chr12 9876716 9e-36
CaES5653 Chr12 30323951 1e-149
CaES5661 Chr12 212800815 1e-126
CaES5672 Chr12 215930697 1e-118
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum