Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES4107 Chr12 49443261 3e-81
CaES4133 Chr12 199651340 1e-132
CaES4150 Chr12 114691296 1e-105
CaES4214 Chr12 201600475 1e-130
CaES4217 Chr12 4218289 1e-149
CaES4224 Chr12 7957447 1e-131
CaES4248 Chr12 4121912 1e-157
CaES4261 Chr12 1991885 1e-110
CaES4287 Chr12 35089361 4e-97
CaES4289 Chr12 4470811 1e-119
CaES4312 Chr12 28782 1e-143
CaES4331 Chr12 73278869 6e-63
CaES4343 Chr12 18120882 1e-140
CaES4425 Chr12 222974554 5e-82
CaES4442 Chr12 3403782 3e-83
CaES4461 Chr12 29945 1e-149
CaES4464 Chr12 155402160 1e-120
CaES4466 Chr12 9812482 1e-102
CaES4469 Chr12 2098001 1e-142
CaES4486 Chr12 22104177 1e-135
CaES4511 Chr12 228553349 1e-118
CaES4522 Chr12 207303055 3e-91
CaES4527 Chr12 188582849 1e-147
CaES4539 Chr12 3652851 3e-92
CaES4575 Chr12 65680698 1e-135
CaES4582 Chr12 197819773 2e-99
CaES4583 Chr12 66500 1e-132
CaES4591 Chr12 223406660 1e-110
CaES4594 Chr12 159743991 5e-95
CaES4600 Chr12 57713980 1e-124
CaES4602 Chr12 223711869 1e-122
CaES4612 Chr12 41281531 1e-112
CaES4617 Chr12 4456686 1e-124
CaES4632 0.0 0 Chr12 49478876 2e-76
CaES4654 Chr12 189614988 9e-93
CaES4669 Chr12 1701879 1e-116
CaES4691 Chr12 200453422 1e-158
CaES4707 Chr12 30323822 1e-125
CaES4711 Chr12 189615259 2e-87
CaES4730 Chr12 2715964 1e-127
CaES4756 Chr12 40987920 1e-48
CaES4769 Chr12 229371375 1e-107
CaES4770 Chr12 228074548 1e-105
CaES4789 Chr12 200630082 6e-21
CaES4795 Chr12 1939758 2e-84
CaES4807 Chr12 151427941 1e-138
CaES4818 Chr12 3549126 1e-113
CaES4847 Chr12 8115387 1e-122
CaES4872 Chr12 2466222 1e-100
CaES4875 Chr12 184822846 1e-42
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum