Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES3318 Chr12 4840445 1e-33
CaES3324 Chr12 229383354 1e-37
CaES3345 Chr12 108813756 9e-30
CaES3351 Chr12 51515113 9e-93
CaES3379 Chr12 229732187 2e-94
CaES3383 Chr12 11427205 3e-94
CaES3417 Chr12 195051785 1e-139
CaES3456 Chr12 151749054 1e-136
CaES3474 Chr12 42241920 1e-120
CaES3475 Chr12 19345762 3e-71
CaES3479 Chr12 73393614 2e-93
CaES3485 Chr12 8243654 1e-125
CaES3488 Chr12 7062205 1e-145
CaES3493 Chr12 82273799 1e-114
CaES3499 Chr12 228187878 1e-146
CaES3502 Chr12 181693925 2e-72
CaES3538 0.01 192 Chr12 98691874 1e-138
CaES3541 Chr12 155440243 2e-84
CaES3561 Chr12 197819329 1e-142
CaES3593 Chr12 195301869 3e-90
CaES3652 Chr12 207592294 5e-98
CaES3658 Chr12 167625041 1e-61
CaES3677 Chr12 17239423 1e-129
CaES3686 Chr12 42001220 1e-111
CaES3690 Chr12 207591951 4e-73
CaES3700 Chr12 228371013 2e-74
CaES3718 Chr12 219832302 1e-121
CaES3721 Chr12 226378901 1e-127
CaES3735 0.0 192 Chr12 40636455 1e-124
CaES3745 Chr12 209786812 1e-124
CaES3750 Chr12 9566105 1e-109
CaES3811 Chr12 216391405 1e-126
CaES3816 Chr12 80900426 1e-140
CaES3819 Chr12 214813976 1e-105
CaES3840 Chr12 20563297 1e-81
CaES3844 Chr12 47721079 1e-155
CaES3858 Chr12 37459917 1e-119
CaES3859 Chr12 201571120 6e-83
CaES3865 Chr12 58807468 1e-140
CaES3873 Chr12 176632764 1e-111
CaES3881 Chr12 228613007 1e-83
CaES3917 Chr12 200458098 1e-95
CaES3940 Chr12 219875389 5e-96
CaES3955 Chr12 1942184 1e-121
CaES3961 Chr12 42894674 5e-93
CaES3994 Chr12 975298 1e-118
CaES4002 Chr12 73469323 1e-130
CaES4053 Chr12 174592845 1e-133
CaES4057 Chr12 226684601 3e-98
CaES4105 Chr12 156106552 1e-114
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum