Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES5030 Chr12 148468234 1e-100
CaES2367 Chr12 150668995 1e-108
CaES1280 Chr12 150855322 8e-98
CaES4807 Chr12 151427941 1e-138
CaES3456 Chr12 151749054 1e-136
CaES0624 Chr12 151750374 7e-84
CaES1194 Chr12 151750374 4e-76
CaES1337 Chr12 154110434 4e-94
CaES4464 Chr12 155402160 1e-120
CaES3541 Chr12 155440243 2e-84
CaES4105 Chr12 156106552 1e-114
CaES4594 Chr12 159743991 5e-95
CaES2936 Chr12 161998495 1e-107
CaES3258 Chr12 165572095 1e-122
CaES2965 Chr12 165703109 3e-98
CaES3658 Chr12 167625041 1e-61
CaES2119 Chr12 167663567 1e-120
CaES2651 Chr12 169110319 1e-85
CaES1047 Chr12 171510265 1e-126
CaES1508 Chr12 172786001 1e-91
CaES2059 Chr12 173142006 1e-116
CaES2309 Chr12 173766652 4e-91
CaES2899 Chr12 174040961 1e-139
CaES4053 Chr12 174592845 1e-133
CaES5680 Chr12 174594655 3e-38
CaES3873 Chr12 176632764 1e-111
CaES2116 Chr12 181676048 5e-46
CaES3502 Chr12 181693925 2e-72
CaES0607 Chr12 183043321 1e-31
CaES0200 Chr12 184101974 1e-130
CaES2641 Chr12 184102966 5e-82
CaES2759 Chr12 184784609 1e-139
CaES4875 Chr12 184822846 1e-42
CaES4925 Chr12 184823307 1e-106
CaES0569 Chr12 185517439 5e-99
CaES2880 Chr12 186229803 4e-45
CaES1427 Chr12 188090267 1e-115
CaES4527 Chr12 188582849 1e-147
CaES4654 Chr12 189614988 9e-93
CaES4711 Chr12 189615259 2e-87
CaES0491 Chr12 191680789 1e-117
CaES2796 Chr12 191880194 7e-76
CaES2731 Chr12 192922040 1e-147
CaES2875 Chr12 193530738 1e-106
CaES1198 Chr12 194665253 1e-124
CaES3417 Chr12 195051785 1e-139
CaES3593 Chr12 195301869 3e-90
CaES3302 Chr12 196725762 9e-86
CaES2386 Chr12 197638113 0.0
CaES1493 Chr12 197782770 3e-53
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum