Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES2441 Chr12 18492159 1e-101
CaES2464 Chr12 14141700 2e-27
CaES2480 Chr12 1047997 6e-51
CaES2483 Chr12 227985309 6e-25
CaES2486 Chr12 210945232 5e-94
CaES2530 Chr12 72340095 3e-94
CaES2542 Chr12 2215298 1e-111
CaES2572 Chr12 225385637 1e-103
CaES2605 Chr12 216588095 1e-154
CaES2629 Chr12 63696 1e-115
CaES2641 Chr12 184102966 5e-82
CaES2651 Chr12 169110319 1e-85
CaES2699 Chr12 36141610 1e-127
CaES2712 Chr12 37926447 1e-131
CaES2731 Chr12 192922040 1e-147
CaES2758 Chr12 6555760 1e-107
CaES2759 Chr12 184784609 1e-139
CaES2784 Chr12 13995628 1e-113
CaES2786 Chr12 58887412 1e-142
CaES2789 Chr12 11952351 7e-81
CaES2796 Chr12 191880194 7e-76
CaES2820 Chr12 229358446 1e-98
CaES2862 Chr12 20310609 1e-111
CaES2875 Chr12 193530738 1e-106
CaES2880 Chr12 186229803 4e-45
CaES2882 Chr12 222069212 2e-66
CaES2899 Chr12 174040961 1e-139
CaES2936 Chr12 161998495 1e-107
CaES2965 Chr12 165703109 3e-98
CaES2976 Chr12 33755226 1e-124
CaES2988 Chr12 200629847 1e-39
CaES3008 Chr12 11807618 1e-118
CaES3027 Chr12 32878481 2e-74
CaES3035 Chr12 48756 1e-117
CaES3038 Chr12 8852241 1e-106
CaES3112 Chr12 8708362 2e-92
CaES3115 Chr12 222609854 1e-85
CaES3144 Chr12 227337374 6e-98
CaES3149 Chr12 21032039 1e-142
CaES3157 Chr12 143487494 1e-141
CaES3238 Chr12 200542916 5e-24
CaES3247 Chr12 43889575 1e-100
CaES3256 Chr12 9715914 1e-110
CaES3258 Chr12 165572095 1e-122
CaES3269 Chr12 8708685 7e-99
CaES3302 Chr12 196725762 9e-86
CaES3306 Chr12 3739670 9e-80
CaES3307 Chr12 11953266 2e-63
CaES3311 Chr12 13095599 3e-67
CaES3312 Chr12 72860 6e-92
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum