Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES1905 Chr12 14160756 1e-154
CaES0949 Chr12 17237156 9e-82
CaES3677 Chr12 17239423 1e-129
CaES4343 Chr12 18120882 1e-140
CaES2114 Chr12 18214550 8e-99
CaES2441 Chr12 18492159 1e-101
CaES2404 Chr12 19316842 1e-137
CaES3475 Chr12 19345762 3e-71
CaES1236 Chr12 19618630 1e-104
CaES0650 Chr12 19695898 2e-70
CaES1099 Chr12 19850250 1e-131
CaES2862 Chr12 20310609 1e-111
CaES1335 Chr12 20469029 1e-139
CaES3840 Chr12 20563297 1e-81
CaES5473 Chr12 20827813 9e-66
CaES0013 Chr12 20898420 5e-23
CaES3149 Chr12 21032039 1e-142
CaES4486 Chr12 22104177 1e-135
CaES1968 Chr12 23141464 9e-81
CaES1438 Chr12 26304736 2e-85
CaES5325 Chr12 26715378 1e-125
CaES5101 Chr12 26720602 1e-108
CaES1977 Chr12 26720990 1e-142
CaES5444 Chr12 29157312 5e-41
CaES4707 Chr12 30323822 1e-125
CaES5653 Chr12 30323951 1e-149
CaES4987 Chr12 30594381 1e-103
CaES2373 Chr12 32444433 4e-79
CaES3027 Chr12 32878481 2e-74
CaES5447 Chr12 32901040 2e-21
CaES2976 Chr12 33755226 1e-124
CaES4287 Chr12 35089361 4e-97
CaES1960 Chr12 35115244 1e-105
CaES2699 Chr12 36141610 1e-127
CaES3858 Chr12 37459917 1e-119
CaES2712 Chr12 37926447 1e-131
CaES5720 Chr12 39002916 3e-67
CaES5149 Chr12 40383873 3e-25
CaES5479 Chr12 40981669 8e-56
CaES0330 Chr12 40981684 2e-54
CaES4756 Chr12 40987920 1e-48
CaES4612 Chr12 41281531 1e-112
CaES3686 Chr12 42001220 1e-111
CaES5312 Chr12 42016287 1e-59
CaES3474 Chr12 42241920 1e-120
CaES3961 Chr12 42894674 5e-93
CaES3247 Chr12 43889575 1e-100
CaES3844 Chr12 47721079 1e-155
CaES1461 Chr12 47977231 5e-25
CaES0473 Chr12 47977515 1e-62
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum