Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES1691 Chr12 1552710 7e-37
CaES1693 Chr12 227948576 1e-74
CaES1703 Chr12 227365522 3e-98
CaES1707 Chr12 12458962 1e-110
CaES1744 Chr12 12025509 1e-132
CaES1781 Chr12 229223423 3e-64
CaES1789 Chr12 4107503 2e-86
CaES1799 Chr12 229349267 1e-64
CaES1810 Chr12 3061839 1e-83
CaES1839 Chr12 11659359 1e-110
CaES1856 Chr12 215155829 1e-140
CaES1887 Chr12 221160238 9e-60
CaES1889 Chr12 8151213 1e-49
CaES1895 Chr12 3600902 8e-36
CaES1903 Chr12 8181849 1e-124
CaES1905 Chr12 14160756 1e-154
CaES1950 Chr12 225487790 1e-130
CaES1960 Chr12 35115244 1e-105
CaES1967 Chr12 121145126 3e-65
CaES1968 Chr12 23141464 9e-81
CaES1970 Chr12 113159946 1e-85
CaES1977 Chr12 26720990 1e-142
CaES1982 Chr12 122310940 1e-150
CaES2054 Chr12 226653090 1e-112
CaES2055 Chr12 81575787 1e-120
CaES2059 Chr12 173142006 1e-116
CaES2086 Chr12 84073862 7e-86
CaES2112 Chr12 8281520 1e-109
CaES2114 Chr12 18214550 8e-99
CaES2116 Chr12 181676048 5e-46
CaES2119 Chr12 167663567 1e-120
CaES2127 Chr12 225120902 1e-108
CaES2131 Chr12 83038914 1e-111
CaES2132 Chr12 96906808 6e-92
CaES2137 Chr12 9524129 1e-123
CaES2145 Chr12 3711471 2e-81
CaES2146 Chr12 218501203 1e-132
CaES2157 Chr12 11924315 6e-65
CaES2172 Chr12 269490 1e-138
CaES2265 0.0 192 Chr12 140477 1e-119
CaES2290 Chr12 3461564 1e-100
CaES2309 Chr12 173766652 4e-91
CaES2344 Chr12 228624225 6e-80
CaES2365 Chr12 8231469 1e-137
CaES2367 Chr12 150668995 1e-108
CaES2373 Chr12 32444433 4e-79
CaES2375 Chr12 12783455 1e-132
CaES2386 Chr12 197638113 0.0
CaES2397 Chr12 227991596 4e-62
CaES2404 Chr12 19316842 1e-137
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum