Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0787 Chr12 228361641 1e-69
CaES0876 Chr12 4017274 1e-59
CaES0926 Chr12 61200902 1e-60
CaES0931 Chr12 202910686 1e-126
CaES0938 Chr12 223407378 1e-123
CaES0947 Chr12 12290650 2e-67
CaES0949 Chr12 17237156 9e-82
CaES0984 Chr12 12697391 5e-74
CaES1005 Chr12 115077825 2e-63
CaES1008 Chr12 9487341 2e-91
CaES1011 Chr12 61124436 5e-81
CaES1047 Chr12 171510265 1e-126
CaES1099 Chr12 19850250 1e-131
CaES1133 Chr12 208548249 6e-74
CaES1168 Chr12 7667216 1e-153
CaES1172 Chr12 223672128 2e-83
CaES1182 Chr12 222612936 1e-98
CaES1194 Chr12 151750374 4e-76
CaES1198 Chr12 194665253 1e-124
CaES1236 Chr12 19618630 1e-104
CaES1237 Chr12 2622518 1e-128
CaES1254 Chr12 211148652 1e-144
CaES1264 Chr12 210949504 1e-107
CaES1280 Chr12 150855322 8e-98
CaES1287 Chr12 227932099 4e-93
CaES1335 Chr12 20469029 1e-139
CaES1337 Chr12 154110434 4e-94
CaES1341 Chr12 50267811 1e-120
CaES1387 Chr12 61136027 1e-80
CaES1388 Chr12 143492580 1e-105
CaES1420 Chr12 229832824 1e-85
CaES1427 Chr12 188090267 1e-115
CaES1438 Chr12 26304736 2e-85
CaES1461 Chr12 47977231 5e-25
CaES1465 0.0 0 Chr12 115225624 1e-115
CaES1469 Chr12 226228354 1e-80
CaES1472 Chr12 219051225 4e-72
CaES1493 Chr12 197782770 3e-53
CaES1507 Chr12 226564984 1e-76
CaES1508 Chr12 172786001 1e-91
CaES1545 Chr12 9880930 1e-128
CaES1548 Chr12 229371416 6e-59
CaES1564 Chr12 2786606 5e-40
CaES1566 Chr12 4010826 7e-43
CaES1577 Chr12 229881886 2e-68
CaES1578 Chr12 228018456 3e-70
CaES1608 Chr12 229231827 1e-102
CaES1647 Chr12 200105915 2e-79
CaES1656 Chr12 207948848 1e-124
CaES1690 Chr12 4503327 1e-103
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum