Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 353


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0415 Chr12 4694496 1e-132
CaES4891 Chr12 4840180 3e-70
CaES3318 Chr12 4840445 1e-33
CaES2758 Chr12 6555760 1e-107
CaES3488 Chr12 7062205 1e-145
CaES1168 Chr12 7667216 1e-153
CaES4224 Chr12 7957447 1e-131
CaES0387 Chr12 8054217 5e-95
CaES4847 Chr12 8115387 1e-122
CaES1889 Chr12 8151213 1e-49
CaES1903 Chr12 8181849 1e-124
CaES2365 Chr12 8231469 1e-137
CaES3485 Chr12 8243654 1e-125
CaES2112 Chr12 8281520 1e-109
CaES3112 Chr12 8708362 2e-92
CaES3269 Chr12 8708685 7e-99
CaES3038 Chr12 8852241 1e-106
CaES1008 Chr12 9487341 2e-91
CaES2137 Chr12 9524129 1e-123
CaES3750 Chr12 9566105 1e-109
CaES0236 Chr12 9579559 1e-132
CaES3256 Chr12 9715914 1e-110
CaES5234 Chr12 9797729 4e-69
CaES4466 Chr12 9812482 1e-102
CaES5650 Chr12 9876716 9e-36
CaES1545 Chr12 9880930 1e-128
CaES3383 Chr12 11427205 3e-94
CaES1839 Chr12 11659359 1e-110
CaES3008 Chr12 11807618 1e-118
CaES0048 Chr12 11915765 1e-100
CaES2157 Chr12 11924315 6e-65
CaES2789 Chr12 11952351 7e-81
CaES3307 Chr12 11953266 2e-63
CaES1744 Chr12 12025509 1e-132
CaES0193 Chr12 12286150 2e-83
CaES0947 Chr12 12290650 2e-67
CaES0744 Chr12 12452069 1e-45
CaES5028 Chr12 12455419 3e-85
CaES1707 Chr12 12458962 1e-110
CaES0984 Chr12 12697391 5e-74
CaES2375 Chr12 12783455 1e-132
CaES3311 Chr12 13095599 3e-67
CaES4979 Chr12 13113891 6e-78
CaES0353 Chr12 13933182 1e-130
CaES2784 Chr12 13995628 1e-113
CaES2464 Chr12 14141700 2e-27
CaES1905 Chr12 14160756 1e-154
CaES0949 Chr12 17237156 9e-82
CaES3677 Chr12 17239423 1e-129
CaES4343 Chr12 18120882 1e-140
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 353


MarkerDB | Capsicum annuum