Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr11

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 277

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
Name Position*
CaES5054 Chr11 21777891 1e-144
CaES5103 Chr11 4350261 1e-121
CaES5128 Chr11 218611623 8e-75
CaES5185 Chr11 7809113 1e-122
CaES5209 Chr11 179045037 6e-85
CaES5251 Chr11 3681383 2e-86
CaES5268 Chr11 9771915 1e-124
CaES5274 Chr11 3672096 1e-92
CaES5283 Chr11 213031494 1e-121
CaES5310 Chr11 20836351 7e-25
CaES5313 Chr11 1392795 1e-85
CaES5343 Chr11 185432688 1e-110
CaES5364 0.0 191 Chr11 102808651 1e-136
CaES5415 Chr11 158714485 7e-56
CaES5423 Chr11 218218975 1e-77
CaES5426 Chr11 218566888 1e-114
CaES5483 Chr11 188117214 2e-50
CaES5492 Chr11 176340104 2e-95
CaES5493 Chr11 6591828 2e-81
CaES5523 Chr11 169398216 5e-81
CaES5533 Chr11 194593274 2e-48
CaES5547 Chr11 176782749 1e-121
CaES5597 Chr11 12797229 4e-84
CaES5617 Chr11 161848461 1e-83
CaES5666 Chr11 5761216 1e-59
CaES5690 Chr11 1555167 3e-33
CaES5724 Chr11 161844282 1e-120
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 277

MarkerDB | Capsicum annuum