Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr11

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 277

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
Name Position*
CaES5283 Chr11 213031494 1e-121
CaES1944 Chr11 213951465 2e-61
CaES4915 Chr11 213961959 1e-115
CaES2616 Chr11 214101785 1e-136
CaES1316 Chr11 214339586 1e-137
CaES3875 Chr11 214475160 1e-126
CaES2109 Chr11 215047743 1e-113
CaES2438 Chr11 215389025 1e-116
CaES4141 Chr11 215470129 1e-107
CaES0762 Chr11 215586567 1e-119
CaES0486 Chr11 215806867 8e-27
CaES1462 Chr11 216437114 5e-56
CaES3655 Chr11 216496578 3e-43
CaES4324 Chr11 216862972 1e-107
CaES0535 Chr11 216900678 1e-113
CaES1116 Chr11 218020788 1e-136
CaES4929 Chr11 218174336 1e-101
CaES5423 Chr11 218218975 1e-77
CaES1766 Chr11 218262379 1e-127
CaES4244 Chr11 218484308 1e-48
CaES5426 Chr11 218566888 1e-114
CaES5128 Chr11 218611623 8e-75
CaES1833 Chr11 218673392 3e-99
CaES4054 Chr11 218883956 9e-99
CaES3126 Chr11 218904871 1e-151
CaES0220 Chr11 219608589 1e-111
CaES0042 Chr11 219733060 1e-93
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 277

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