Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr11

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 277


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4079 Chr11 12953664 1e-134
CaES4083 Chr11 3549509 2e-68
CaES4092 Chr11 132631260 1e-100
CaES4099 Chr11 3750273 3e-67
CaES4122 Chr11 133985824 1e-121
CaES4141 Chr11 215470129 1e-107
CaES4154 Chr11 187254618 1e-124
CaES4158 Chr11 186363352 1e-103
CaES4198 Chr11 156313334 4e-80
CaES4220 Chr11 170573668 1e-99
CaES4239 Chr11 181752036 1e-50
CaES4244 Chr11 218484308 1e-48
CaES4324 Chr11 216862972 1e-107
CaES4332 Chr11 3859788 4e-90
CaES4336 Chr11 182933952 1e-119
CaES4362 Chr11 180757263 1e-125
CaES4367 Chr11 203031564 1e-127
CaES4386 Chr11 159917890 7e-34
CaES4412 Chr11 1228983 1e-102
CaES4415 Chr11 198233579 1e-143
CaES4449 Chr11 168278732 1e-115
CaES4556 Chr11 173422610 1e-104
CaES4561 Chr11 196878790 1e-116
CaES4606 Chr11 14708816 1e-46
CaES4613 0.0 25 Chr11 145165917 1e-103
CaES4616 0.237 191 Chr11 85142879 1e-127
CaES4640 Chr11 87764326 3e-66
CaES4660 Chr11 202460226 1e-134
CaES4672 Chr11 7815884 1e-124
CaES4681 Chr11 3768653 5e-88
CaES4777 Chr11 130834417 1e-178
CaES4810 Chr11 5351520 1e-118
CaES4860 Chr11 114945936 1e-43
CaES4893 Chr11 2947419 1e-129
CaES4896 0.0 0 Chr11 36804096 1e-105
CaES4898 Chr11 5291147 1e-84
CaES4904 Chr11 188331079 3e-32
CaES4913 Chr11 11319096 1e-101
CaES4915 Chr11 213961959 1e-115
CaES4929 Chr11 218174336 1e-101
CaES4931 Chr11 6254827 1e-134
CaES4936 Chr11 8696460 1e-138
CaES4958 Chr11 208576183 1e-112
CaES4976 Chr11 24915406 1e-106
CaES4990 Chr11 150973 1e-134
CaES5007 Chr11 4405919 1e-120
CaES5013 Chr11 210356570 1e-130
CaES5015 Chr11 194525368 1e-147
CaES5032 Chr11 145821008 2e-99
CaES5041 Chr11 201640241 1e-120
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 277

MarkerDB | Capsicum annuum