Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr10

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 329


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5155 Chr10 75356697 1e-113
CaES5192 Chr10 204481038 1e-68
CaES5217 Chr10 160528390 1e-103
CaES5226 Chr10 28695532 8e-70
CaES5233 Chr10 165982277 1e-102
CaES5302 Chr10 41994251 1e-117
CaES5433 Chr10 136800855 3e-91
CaES5457 Chr10 203944483 3e-46
CaES5465 Chr10 44771005 3e-96
CaES5468 Chr10 118304195 1e-40
CaES5503 Chr10 10834312 2e-78
CaES5505 Chr10 3525284 5e-42
CaES5507 Chr10 192784139 2e-51
CaES5527 Chr10 200861665 3e-98
CaES5556 Chr10 202491789 1e-74
CaES5579 Chr10 204904052 1e-114
CaES5585 Chr10 200198859 2e-92
CaES5593 Chr10 3358822 7e-96
CaES5600 Chr10 114656655 2e-42
CaES5604 Chr10 16018286 1e-120
CaES5605 Chr10 972714 2e-80
CaES5632 Chr10 203095650 2e-50
CaES5649 Chr10 175654613 1e-66
CaES5671 Chr10 28377402 1e-104
CaES5692 Chr10 36690922 1e-119
CaES5711 Chr10 161086 4e-92
CaES5727 Chr10 156639421 1e-119
CaES5733 Chr10 7558828 1e-81
CaES5740 Chr10 162583642 9e-99
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 329

MarkerDB | Capsicum annuum