Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES3513 0.0 0 Chr09 55585179 1e-110
CaES3583 0.0 0 Chr09 152329579 1e-115
CaES2930 0.234 192 Chr09 124579619 1e-142
CaES4192 0.271 192 Chr09 217970055 1e-122
CaES1027 0.016 192 Chr09 228926962 1e-109
CaES4070 Chr09 82822 2e-85
CaES3226 Chr09 578209 5e-96
CaES4438 Chr09 601460 1e-121
CaES0084 Chr09 732362 2e-70
CaES2350 Chr09 746951 7e-33
CaES3448 Chr09 751736 1e-117
CaES3355 Chr09 835406 2e-84
CaES5298 Chr09 864990 7e-53
CaES3646 Chr09 874379 1e-111
CaES0015 Chr09 892002 7e-92
CaES5484 Chr09 933890 6e-77
CaES0734 Chr09 1053345 9e-42
CaES1582 Chr09 1076060 1e-93
CaES2668 Chr09 1102776 1e-152
CaES1422 Chr09 1279711 1e-130
CaES0487 Chr09 1522769 1e-100
CaES3715 Chr09 3639810 4e-55
CaES2275 Chr09 4857253 8e-74
CaES4543 Chr09 4875786 1e-144
CaES2445 Chr09 5034572 4e-27
CaES2529 Chr09 5038224 2e-43
CaES4924 Chr09 5074789 4e-45
CaES5738 Chr09 5088940 1e-110
CaES1306 Chr09 5239720 4e-89
CaES0334 Chr09 5350403 1e-102
CaES0435 Chr09 5466870 1e-124
CaES1583 Chr09 5529691 2e-38
CaES0180 Chr09 5549738 1e-106
CaES4963 Chr09 5625287 1e-101
CaES3399 Chr09 5642915 1e-149
CaES2234 Chr09 5753290 1e-121
CaES1223 Chr09 5803733 5e-88
CaES2227 Chr09 5819281 2e-94
CaES3407 Chr09 5941556 1e-112
CaES2719 Chr09 6034533 8e-76
CaES4155 Chr09 6433657 2e-96
CaES1901 Chr09 6451728 1e-155
CaES2461 Chr09 6475761 6e-93
CaES3492 Chr09 6691884 1e-100
CaES3575 Chr09 6706687 3e-68
CaES4729 Chr09 6728760 2e-64
CaES2468 Chr09 6734002 6e-21
CaES5175 Chr09 6753338 6e-35
CaES5413 Chr09 6791595 7e-35
CaES3380 Chr09 6983835 2e-57
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282


MarkerDB | Capsicum annuum