Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES5240 Chr09 234592001 7e-90
CaES0485 Chr09 234592038 1e-111
CaES2978 Chr09 234788186 2e-78
CaES0639 Chr09 235088693 3e-48
CaES2213 Chr09 235127071 3e-27
CaES1192 Chr09 235127203 1e-111
CaES1567 Chr09 235199382 2e-66
CaES5567 Chr09 235469823 5e-54
CaES4422 Chr09 235475082 5e-98
CaES2175 Chr09 235513033 1e-68
CaES0940 Chr09 235514250 1e-119
CaES4051 Chr09 235781281 1e-139
CaES3352 Chr09 236451758 1e-130
CaES0178 Chr09 236481810 4e-97
CaES0723 Chr09 236522367 1e-143
CaES2490 Chr09 236725647 1e-54
CaES4811 Chr09 237328129 6e-68
CaES2395 Chr09 237356188 7e-85
CaES3853 Chr09 237356614 1e-143
CaES4905 Chr09 237681584 1e-145
CaES0252 Chr09 237692509 4e-36
CaES0510 Chr09 237694644 5e-60
CaES4882 Chr09 237715610 3e-98
CaES4637 Chr09 237744914 5e-98
CaES4506 Chr09 237953607 1e-101
CaES0289 Chr09 237956216 1e-100
CaES3913 Chr09 237964617 1e-128
CaES1092 Chr09 238668037 2e-62
CaES1529 Chr09 238668117 2e-57
CaES3835 Chr09 238672556 1e-114
CaES3823 Chr09 238687689 1e-131
CaES0400 Chr09 238688616 1e-124
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282


MarkerDB | Capsicum annuum