Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5044 Chr09 44110529 1e-115
CaES5064 Chr09 96027213 1e-99
CaES5083 Chr09 129133806 1e-108
CaES5090 Chr09 229487553 1e-145
CaES5134 Chr09 85469141 1e-113
CaES5159 Chr09 197582254 7e-21
CaES5175 Chr09 6753338 6e-35
CaES5208 Chr09 198501794 1e-94
CaES5228 Chr09 198371870 4e-90
CaES5240 Chr09 234592001 7e-90
CaES5242 Chr09 130763478 8e-84
CaES5298 Chr09 864990 7e-53
CaES5331 Chr09 105634653 1e-100
CaES5345 Chr09 218318815 3e-73
CaES5350 Chr09 7658846 1e-110
CaES5363 Chr09 136758462 1e-124
CaES5378 Chr09 21115404 1e-33
CaES5389 Chr09 185252497 1e-51
CaES5413 Chr09 6791595 7e-35
CaES5436 Chr09 25318082 5e-46
CaES5460 Chr09 169597090 6e-53
CaES5484 Chr09 933890 6e-77
CaES5521 Chr09 9387471 5e-65
CaES5535 Chr09 218640110 4e-97
CaES5567 Chr09 235469823 5e-54
CaES5674 Chr09 54120588 1e-100
CaES5693 Chr09 228912362 6e-46
CaES5712 Chr09 43778912 3e-82
CaES5717 Chr09 48513287 1e-123
CaES5738 Chr09 5088940 1e-110
CaES5744 Chr09 28913052 7e-77
CaES5749 Chr09 229102647 1e-71
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Capsicum annuum