Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES3912 Chr09 15797372 1e-105
CaES3913 Chr09 237964617 1e-128
CaES3949 Chr09 117498025 1e-110
CaES3989 Chr09 222472049 1e-119
CaES4003 Chr09 10932400 6e-90
CaES4045 Chr09 7046958 1e-124
CaES4051 Chr09 235781281 1e-139
CaES4055 Chr09 185253088 1e-145
CaES4064 Chr09 188162642 2e-33
CaES4070 Chr09 82822 2e-85
CaES4102 Chr09 198369384 1e-75
CaES4143 Chr09 10936839 3e-87
CaES4153 Chr09 105503783 1e-142
CaES4155 Chr09 6433657 2e-96
CaES4166 Chr09 232363644 5e-90
CaES4182 Chr09 59423883 1e-91
CaES4183 Chr09 10126479 1e-113
CaES4192 0.271 192 Chr09 217970055 1e-122
CaES4219 Chr09 157851160 5e-79
CaES4290 Chr09 178361571 5e-93
CaES4292 Chr09 10932541 1e-102
CaES4319 Chr09 43884296 1e-136
CaES4326 Chr09 190170309 1e-132
CaES4349 Chr09 166196719 4e-89
CaES4366 Chr09 9935252 8e-77
CaES4380 Chr09 20747751 1e-104
CaES4422 Chr09 235475082 5e-98
CaES4438 Chr09 601460 1e-121
CaES4452 Chr09 213614121 3e-88
CaES4489 Chr09 7216344 1e-106
CaES4506 Chr09 237953607 1e-101
CaES4543 Chr09 4875786 1e-144
CaES4574 Chr09 112316899 1e-135
CaES4637 Chr09 237744914 5e-98
CaES4638 Chr09 29550480 4e-74
CaES4680 Chr09 12072093 2e-67
CaES4697 Chr09 7018526 5e-87
CaES4724 Chr09 81884039 1e-147
CaES4729 Chr09 6728760 2e-64
CaES4734 Chr09 71915966 1e-119
CaES4811 Chr09 237328129 6e-68
CaES4841 Chr09 15404149 2e-43
CaES4851 Chr09 21171926 3e-95
CaES4882 Chr09 237715610 3e-98
CaES4889 Chr09 11801074 1e-107
CaES4905 Chr09 237681584 1e-145
CaES4924 Chr09 5074789 4e-45
CaES4957 Chr09 7636545 2e-99
CaES4963 Chr09 5625287 1e-101
CaES5021 Chr09 233598298 1e-121
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282


MarkerDB | Capsicum annuum