Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2930 0.234 192 Chr09 124579619 1e-142
CaES2975 Chr09 203754396 1e-155
CaES2978 Chr09 234788186 2e-78
CaES2983 Chr09 207934739 1e-139
CaES3097 Chr09 134628189 1e-124
CaES3147 Chr09 8037453 1e-106
CaES3226 Chr09 578209 5e-96
CaES3295 Chr09 218066293 1e-103
CaES3300 Chr09 114026643 1e-131
CaES3309 Chr09 165458971 1e-110
CaES3340 Chr09 220433269 1e-70
CaES3346 Chr09 184390433 8e-52
CaES3352 Chr09 236451758 1e-130
CaES3353 Chr09 19005571 8e-71
CaES3355 Chr09 835406 2e-84
CaES3358 Chr09 116761937 1e-121
CaES3380 Chr09 6983835 2e-57
CaES3399 Chr09 5642915 1e-149
CaES3407 Chr09 5941556 1e-112
CaES3448 Chr09 751736 1e-117
CaES3450 Chr09 155055134 1e-153
CaES3492 Chr09 6691884 1e-100
CaES3513 0.0 0 Chr09 55585179 1e-110
CaES3514 Chr09 213239430 9e-94
CaES3575 Chr09 6706687 3e-68
CaES3581 Chr09 172956456 1e-103
CaES3583 0.0 0 Chr09 152329579 1e-115
CaES3591 Chr09 59423883 7e-96
CaES3623 Chr09 23586677 1e-107
CaES3625 Chr09 232475041 4e-95
CaES3637 Chr09 129133827 1e-115
CaES3646 Chr09 874379 1e-111
CaES3647 Chr09 32650654 1e-131
CaES3654 Chr09 7398476 3e-88
CaES3656 Chr09 172536558 1e-139
CaES3665 Chr09 182206681 1e-106
CaES3673 Chr09 119688904 4e-99
CaES3710 Chr09 11968108 1e-132
CaES3715 Chr09 3639810 4e-55
CaES3720 Chr09 134627845 2e-53
CaES3728 Chr09 218768741 1e-102
CaES3734 Chr09 199537563 1e-111
CaES3763 Chr09 14403555 1e-109
CaES3790 Chr09 25215108 3e-78
CaES3798 Chr09 80821318 1e-154
CaES3800 Chr09 178664957 1e-122
CaES3814 Chr09 213548338 1e-119
CaES3823 Chr09 238687689 1e-131
CaES3835 Chr09 238672556 1e-114
CaES3853 Chr09 237356614 1e-143
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Capsicum annuum