Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0778 Chr09 130990714 1e-106
CaES0780 Chr09 234575288 1e-118
CaES0783 Chr09 95791395 1e-68
CaES0788 Chr09 216393727 1e-117
CaES0794 Chr09 183970101 1e-121
CaES0854 Chr09 137622854 1e-109
CaES0940 Chr09 235514250 1e-119
CaES0962 Chr09 50125557 1e-115
CaES0968 Chr09 7574223 1e-122
CaES1016 Chr09 160980199 2e-75
CaES1017 Chr09 219602511 5e-41
CaES1023 Chr09 24427778 1e-146
CaES1025 Chr09 7680897 1e-104
CaES1027 0.016 192 Chr09 228926962 1e-109
CaES1034 Chr09 114034878 1e-104
CaES1040 Chr09 220432777 1e-51
CaES1043 Chr09 172958109 1e-164
CaES1054 Chr09 181008254 1e-125
CaES1066 Chr09 168500950 2e-72
CaES1086 Chr09 48803277 2e-96
CaES1092 Chr09 238668037 2e-62
CaES1127 Chr09 12109412 2e-84
CaES1151 Chr09 192219861 1e-100
CaES1158 Chr09 7388925 1e-108
CaES1192 Chr09 235127203 1e-111
CaES1199 Chr09 11399922 5e-86
CaES1217 Chr09 108899753 1e-113
CaES1223 Chr09 5803733 5e-88
CaES1306 Chr09 5239720 4e-89
CaES1318 Chr09 225538341 1e-110
CaES1372 Chr09 232258468 1e-110
CaES1401 Chr09 218707673 7e-73
CaES1422 Chr09 1279711 1e-130
CaES1425 Chr09 10485503 9e-73
CaES1441 Chr09 15691812 1e-124
CaES1529 Chr09 238668117 2e-57
CaES1544 Chr09 38964729 4e-95
CaES1567 Chr09 235199382 2e-66
CaES1582 Chr09 1076060 1e-93
CaES1583 Chr09 5529691 2e-38
CaES1657 Chr09 25611359 7e-55
CaES1660 Chr09 202087972 1e-112
CaES1678 Chr09 190892825 1e-98
CaES1730 Chr09 163068421 1e-150
CaES1800 Chr09 220516232 1e-37
CaES1836 Chr09 214022231 1e-137
CaES1851 Chr09 82016949 1e-115
CaES1894 Chr09 15564440 3e-60
CaES1901 Chr09 6451728 1e-155
CaES1916 Chr09 23165303 1e-140
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Capsicum annuum