Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr08

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 436


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5186 Chr08 143473846 1e-163
CaES5189 Chr08 147409417 1e-143
CaES5195 Chr08 136239059 1e-127
CaES5200 Chr08 115514156 8e-80
CaES5221 Chr08 123400240 6e-95
CaES5261 Chr08 132609133 2e-34
CaES5290 Chr08 149058905 2e-96
CaES5296 Chr08 58530993 4e-90
CaES5297 Chr08 126432291 9e-61
CaES5299 Chr08 149711764 3e-85
CaES5301 0.432 188 Chr08 153131324 8e-77
CaES5329 Chr08 139416816 2e-68
CaES5344 Chr08 79024491 9e-82
CaES5366 Chr08 122848006 1e-103
CaES5386 Chr08 148388271 1e-95
CaES5398 Chr08 132845294 1e-97
CaES5414 Chr08 132848354 5e-63
CaES5454 Chr08 149095486 7e-64
CaES5455 Chr08 126440365 9e-95
CaES5471 Chr08 135090848 2e-69
CaES5474 Chr08 149746592 2e-78
CaES5489 Chr08 111996845 2e-76
CaES5552 Chr08 145930937 1e-116
CaES5584 Chr08 125957382 1e-44
CaES5607 Chr08 89449389 1e-110
CaES5616 Chr08 134065219 2e-41
CaES5622 Chr08 133150728 1e-111
CaES5627 Chr08 124758674 2e-85
CaES5629 Chr08 121706324 2e-73
CaES5639 Chr08 526957 1e-102
CaES5640 Chr08 146816763 6e-94
CaES5651 Chr08 139468901 1e-114
CaES5696 Chr08 142971640 5e-99
CaES5702 Chr08 122788484 1e-108
CaES5713 Chr08 122612412 8e-55
CaES5714 Chr08 139763162 1e-52
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 436

MarkerDB | Capsicum annuum