Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr08

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 436

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
Name Position*
CaES0445 Chr08 150761369 6e-98
CaES3701 Chr08 150830836 1e-138
CaES3672 Chr08 150883431 1e-151
CaES0554 Chr08 150951936 6e-40
CaES1673 Chr08 150956898 3e-65
CaES1485 Chr08 150984986 3e-53
CaES2755 Chr08 151014671 1e-146
CaES2881 Chr08 151014671 2e-91
CaES2259 Chr08 151062050 1e-139
CaES2492 Chr08 151349101 8e-34
CaES3608 Chr08 151476978 1e-90
CaES3457 Chr08 151477843 1e-142
CaES1740 Chr08 151566526 6e-86
CaES0381 Chr08 151571626 1e-106
CaES0666 Chr08 151577859 1e-108
CaES1697 Chr08 151706056 1e-145
CaES3321 Chr08 151764086 1e-116
CaES4049 Chr08 151789372 1e-132
CaES3631 Chr08 151790906 1e-113
CaES4955 Chr08 151811532 2e-94
CaES0462 Chr08 151836228 1e-118
CaES4267 Chr08 151867849 7e-86
CaES0155 Chr08 151955126 8e-84
CaES0964 Chr08 152257546 8e-81
CaES2448 Chr08 152268570 1e-113
CaES4523 Chr08 152309031 7e-75
CaES1185 Chr08 152310973 4e-75
CaES1382 Chr08 152520651 7e-95
CaES3123 Chr08 152681935 1e-116
CaES0294 Chr08 152760034 5e-25
CaES3054 Chr08 152767391 1e-140
CaES0916 Chr08 152810152 2e-87
CaES2554 Chr08 152948820 3e-66
CaES5301 0.432 188 Chr08 153131324 8e-77
CaES0405 Chr08 153216595 2e-66
CaES3387 Chr08 153276565 1e-152
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 436

MarkerDB | Capsicum annuum