Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr08

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 436


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES5329 Chr08 139416816 2e-68
CaES0176 Chr08 139416879 6e-76
CaES1828 Chr08 139436645 3e-67
CaES5651 Chr08 139468901 1e-114
CaES4708 Chr08 139692121 1e-162
CaES5714 Chr08 139763162 1e-52
CaES0456 Chr08 139794643 2e-85
CaES1178 Chr08 139818639 1e-143
CaES0272 Chr08 140022133 1e-107
CaES2843 Chr08 140029138 1e-76
CaES1281 Chr08 140065058 5e-71
CaES3580 Chr08 140145272 4e-99
CaES0542 Chr08 140161950 8e-97
CaES4125 Chr08 140802840 1e-157
CaES4302 Chr08 140840522 1e-155
CaES0067 Chr08 140944485 1e-125
CaES1098 Chr08 140945625 1e-165
CaES4266 Chr08 141014243 1e-134
CaES2004 Chr08 141142816 1e-143
CaES2001 Chr08 141174075 1e-120
CaES3494 Chr08 141450316 1e-111
CaES2420 Chr08 141545436 1e-65
CaES0539 Chr08 141579919 1e-119
CaES5166 Chr08 141632043 1e-106
CaES3452 Chr08 141950417 1e-147
CaES2410 Chr08 142089831 2e-38
CaES2429 Chr08 142090647 1e-80
CaES0470 Chr08 142108218 3e-85
CaES0661 Chr08 142110081 5e-59
CaES4381 Chr08 142247158 1e-113
CaES0316 Chr08 142347038 1e-120
CaES3106 Chr08 142432434 5e-30
CaES3317 Chr08 142614876 1e-113
CaES5696 Chr08 142971640 5e-99
CaES1796 Chr08 143029196 1e-109
CaES3433 Chr08 143089207 1e-129
CaES3071 Chr08 143089387 1e-130
CaES0223 Chr08 143383039 1e-135
CaES4040 Chr08 143434049 1e-131
CaES3968 Chr08 143448958 1e-125
CaES5186 Chr08 143473846 1e-163
CaES2519 Chr08 143507457 3e-50
CaES1122 Chr08 143515041 1e-127
CaES4298 Chr08 143635084 1e-157
CaES3891 Chr08 143650282 1e-122
CaES0582 Chr08 143671384 1e-104
CaES3420 Chr08 143697366 3e-72
CaES4213 Chr08 143704013 1e-114
CaES3969 Chr08 144061847 1e-131
CaES1551 Chr08 144062249 4e-57
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 436


MarkerDB | Capsicum annuum