Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr08

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 436


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1899 Chr08 106424432 2e-98
CaES1907 Chr08 131389305 1e-118
CaES1909 Chr08 129676413 1e-148
CaES1929 Chr08 147945558 1e-122
CaES1955 Chr08 125844768 3e-84
CaES1964 Chr08 138290704 1e-112
CaES1992 Chr08 1165821 1e-119
CaES2001 Chr08 141174075 1e-120
CaES2004 Chr08 141142816 1e-143
CaES2007 Chr08 126149113 1e-63
CaES2017 Chr08 137955723 1e-101
CaES2018 Chr08 138366728 1e-106
CaES2024 Chr08 53185765 1e-138
CaES2025 Chr08 119278952 1e-113
CaES2028 Chr08 62011859 1e-129
CaES2066 Chr08 102255 7e-91
CaES2068 Chr08 92811591 1e-131
CaES2143 Chr08 137321107 1e-132
CaES2169 Chr08 137627457 6e-79
CaES2177 Chr08 128687914 1e-109
CaES2178 Chr08 128878715 8e-90
CaES2183 Chr08 28608033 1e-118
CaES2217 Chr08 99551226 2e-74
CaES2220 Chr08 147600610 1e-145
CaES2239 Chr08 121026003 1e-102
CaES2259 Chr08 151062050 1e-139
CaES2267 Chr08 98524863 1e-134
CaES2274 Chr08 732088 1e-111
CaES2280 Chr08 146643958 1e-156
CaES2296 Chr08 146804023 3e-98
CaES2347 Chr08 126766251 1e-118
CaES2370 Chr08 138598924 1e-103
CaES2392 Chr08 126181010 1e-146
CaES2410 Chr08 142089831 2e-38
CaES2420 Chr08 141545436 1e-65
CaES2429 Chr08 142090647 1e-80
CaES2448 Chr08 152268570 1e-113
CaES2455 Chr08 130824543 1e-111
CaES2460 Chr08 60199892 3e-96
CaES2477 Chr08 132425027 2e-49
CaES2492 Chr08 151349101 8e-34
CaES2519 Chr08 143507457 3e-50
CaES2531 Chr08 135046831 9e-69
CaES2554 Chr08 152948820 3e-66
CaES2559 Chr08 124625210 2e-71
CaES2564 Chr08 135123255 3e-83
CaES2571 Chr08 121358108 3e-44
CaES2573 Chr08 8392653 2e-78
CaES2577 Chr08 98329055 1e-110
CaES2599 Chr08 660250 1e-130
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 436

MarkerDB | Capsicum annuum