Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr08

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 436


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES2024 Chr08 53185765 1e-138
CaES2604 Chr08 53186293 1e-142
CaES3540 Chr08 53195139 1e-102
CaES4677 Chr08 57042669 1e-134
CaES1517 Chr08 58530782 1e-66
CaES5296 Chr08 58530993 4e-90
CaES2460 Chr08 60199892 3e-96
CaES4625 Chr08 60386094 1e-107
CaES2028 Chr08 62011859 1e-129
CaES0745 Chr08 67002431 1e-124
CaES4881 Chr08 73846138 1e-102
CaES2704 Chr08 74403574 1e-126
CaES3926 Chr08 78386869 1e-112
CaES5344 Chr08 79024491 9e-82
CaES3527 Chr08 79026947 1e-115
CaES1183 Chr08 79026947 1e-119
CaES1649 Chr08 84266774 1e-130
CaES0578 Chr08 84268156 1e-112
CaES5607 Chr08 89449389 1e-110
CaES0162 Chr08 91960412 1e-140
CaES4260 Chr08 92403071 1e-127
CaES5079 Chr08 92411389 1e-114
CaES2068 Chr08 92811591 1e-131
CaES4505 Chr08 92934228 1e-105
CaES1129 Chr08 93818591 1e-131
CaES1245 Chr08 94971782 1e-138
CaES2697 Chr08 95473571 1e-126
CaES0029 Chr08 96054332 3e-61
CaES0967 Chr08 96582329 1e-121
CaES2577 Chr08 98329055 1e-110
CaES5157 Chr08 98332026 6e-49
CaES2267 Chr08 98524863 1e-134
CaES3640 Chr08 98525648 1e-89
CaES0860 Chr08 99027767 1e-76
CaES1019 Chr08 99551226 4e-44
CaES2217 Chr08 99551226 2e-74
CaES0612 Chr08 100327625 2e-39
CaES4160 Chr08 102915483 7e-62
CaES4026 Chr08 103221596 2e-60
CaES0980 Chr08 103665866 1e-122
CaES0771 Chr08 104060918 1e-104
CaES3758 Chr08 106397780 1e-121
CaES3526 Chr08 106422492 9e-58
CaES1899 Chr08 106424432 2e-98
CaES2961 Chr08 108630362 1e-134
CaES0598 Chr08 111783446 1e-116
CaES3683 Chr08 111977019 8e-96
CaES5489 Chr08 111996845 2e-76
CaES0846 Chr08 112010611 1e-119
CaES5200 Chr08 115514156 8e-80
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 436


MarkerDB | Capsicum annuum