Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr07

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 349


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2479 Chr07 213151781 6e-68
CaES2504 Chr07 11572374 6e-43
CaES2532 Chr07 176459781 3e-67
CaES2548 Chr07 220497647 1e-122
CaES2583 Chr07 216513752 1e-126
CaES2592 Chr07 8906270 7e-75
CaES2596 Chr07 84267920 2e-91
CaES2601 Chr07 161635272 5e-91
CaES2624 Chr07 10926103 1e-138
CaES2667 Chr07 218899690 2e-94
CaES2680 Chr07 84142148 1e-141
CaES2690 Chr07 207199107 1e-123
CaES2721 Chr07 214481616 1e-124
CaES2722 Chr07 59787259 1e-138
CaES2753 Chr07 128188628 1e-145
CaES2788 Chr07 1839504 1e-140
CaES2790 0.339 183 Chr07 163894906 1e-114
CaES2799 Chr07 217167513 2e-98
CaES2829 Chr07 176400654 1e-149
CaES2856 Chr07 214171517 1e-153
CaES2858 Chr07 160786468 1e-110
CaES2883 Chr07 4346102 1e-124
CaES2884 Chr07 5961980 1e-128
CaES2946 Chr07 195144040 1e-89
CaES2990 Chr07 140959700 2e-69
CaES2995 Chr07 77487388 1e-144
CaES3017 Chr07 9530797 4e-36
CaES3047 Chr07 212272014 2e-64
CaES3077 Chr07 210550042 3e-94
CaES3079 Chr07 203153039 8e-83
CaES3090 Chr07 144018672 1e-128
CaES3098 Chr07 166290801 1e-145
CaES3100 Chr07 154842662 1e-126
CaES3131 Chr07 105748081 1e-112
CaES3132 Chr07 150693098 8e-94
CaES3167 Chr07 5307913 3e-77
CaES3176 Chr07 63464411 3e-47
CaES3180 Chr07 4093352 8e-70
CaES3182 Chr07 5307543 7e-83
CaES3183 Chr07 5307506 2e-75
CaES3185 Chr07 5307911 1e-87
CaES3200 Chr07 4093301 3e-60
CaES3211 Chr07 47620489 1e-126
CaES3221 Chr07 169554523 2e-81
CaES3232 Chr07 10405908 1e-152
CaES3289 Chr07 216835508 1e-93
CaES3296 Chr07 218899690 2e-82
CaES3336 Chr07 10024062 9e-96
CaES3366 Chr07 60670418 3e-58
CaES3384 Chr07 184394505 1e-120
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 349

MarkerDB | Capsicum annuum