Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1911 0.0 190 Chr06 1951592 1e-140
CaES4504 0.0 191 Chr06 81225306 1e-112
CaES2341 0.0 192 Chr06 141250753 1e-123
CaES2584 0.11 189 Chr06 20024931 4e-90
CaES4666 0.14 192 Chr06 24336006 1e-154
CaES5392 0.179 192 Chr06 217274423 1e-124
CaES5512 0.246 191 Chr06 161197567 1e-114
CaES1811 0.463 166 Chr06 89820526 1e-146
CaES5253 0.492 187 Chr06 314014 2e-47
CaES4374 Chr06 54687 1e-126
CaES1906 Chr06 65532 1e-117
CaES1380 Chr06 159475 3e-47
CaES1790 Chr06 223963 5e-46
CaES0287 Chr06 320121 1e-103
CaES2340 Chr06 329312 1e-44
CaES3299 Chr06 336484 1e-52
CaES5701 Chr06 770925 1e-89
CaES0260 Chr06 914998 3e-79
CaES5129 Chr06 935452 1e-116
CaES5539 Chr06 935452 4e-63
CaES5142 Chr06 977208 1e-134
CaES4993 Chr06 1200428 1e-106
CaES4965 Chr06 1201010 1e-147
CaES4853 Chr06 1262968 1e-127
CaES2013 Chr06 1340903 1e-130
CaES0461 Chr06 1581612 2e-91
CaES1221 Chr06 1690673 1e-113
CaES1957 Chr06 1853135 1e-109
CaES2165 Chr06 1855897 1e-107
CaES0088 Chr06 1897444 1e-123
CaES2669 Chr06 1968258 1e-119
CaES4193 Chr06 2283182 6e-60
CaES2110 Chr06 2283368 3e-97
CaES4678 Chr06 2320151 1e-101
CaES1671 Chr06 2417134 1e-71
CaES2672 Chr06 2628382 1e-113
CaES0676 Chr06 2667925 1e-33
CaES1591 Chr06 2673031 2e-58
CaES0291 Chr06 2999294 5e-87
CaES4408 Chr06 3013990 2e-58
CaES4235 Chr06 3013990 9e-44
CaES1342 Chr06 3022865 1e-115
CaES4129 Chr06 3073346 1e-143
CaES0833 Chr06 3078065 7e-45
CaES3053 Chr06 3101139 4e-58
CaES4687 Chr06 3174477 1e-147
CaES5741 Chr06 3240113 2e-39
CaES2299 Chr06 3325858 4e-92
CaES4218 Chr06 3440277 1e-115
CaES5241 Chr06 3775975 3e-43
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum