Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5716 Chr06 170264015 6e-88
CaES5348 Chr06 170342323 4e-98
CaES3570 Chr06 170345273 2e-86
CaES1010 Chr06 170760056 1e-38
CaES4251 Chr06 174555157 2e-91
CaES3621 Chr06 174555267 1e-159
CaES5610 Chr06 176918012 8e-28
CaES3988 Chr06 179354010 1e-137
CaES4577 Chr06 182055668 2e-89
CaES5383 Chr06 182244453 1e-93
CaES0809 Chr06 183073923 1e-116
CaES1797 Chr06 185315961 1e-95
CaES5537 Chr06 191139012 4e-49
CaES3220 Chr06 192025522 1e-113
CaES1024 Chr06 193426783 1e-72
CaES5314 Chr06 193626456 1e-104
CaES2730 Chr06 193670785 6e-75
CaES2993 Chr06 193678412 2e-27
CaES0642 Chr06 193948668 1e-113
CaES2291 Chr06 195648593 1e-111
CaES4209 Chr06 197314262 5e-76
CaES2921 Chr06 198014004 6e-96
CaES3684 Chr06 198040732 1e-143
CaES5382 Chr06 199439899 3e-55
CaES2772 Chr06 201144280 1e-108
CaES4676 Chr06 201279695 8e-85
CaES5542 Chr06 206481725 3e-72
CaES5655 Chr06 208093130 1e-103
CaES5524 Chr06 209271685 1e-102
CaES4293 Chr06 209963338 1e-141
CaES0963 Chr06 210585648 7e-82
CaES3074 Chr06 210813589 1e-127
CaES4391 Chr06 211015632 1e-108
CaES4212 Chr06 211187153 1e-105
CaES1039 Chr06 211293177 1e-117
CaES3473 Chr06 213340759 1e-108
CaES3276 Chr06 213355792 1e-143
CaES2874 Chr06 213380412 1e-122
CaES0862 Chr06 213981173 1e-79
CaES3667 Chr06 214153681 1e-124
CaES4560 Chr06 214587739 1e-148
CaES2609 Chr06 215804929 1e-127
CaES4877 Chr06 216054162 1e-58
CaES0804 Chr06 216075479 1e-101
CaES5266 Chr06 216075479 7e-86
CaES1411 Chr06 216115955 2e-85
CaES1865 Chr06 216461963 1e-119
CaES0702 Chr06 216468163 1e-110
CaES0253 Chr06 216513236 1e-105
CaES3004 Chr06 216640475 1e-151
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum