Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3613 Chr06 10288868 1e-120
CaES3621 Chr06 174555267 1e-159
CaES3627 Chr06 105314495 1e-115
CaES3636 Chr06 152275742 1e-154
CaES3639 Chr06 57691248 1e-121
CaES3641 Chr06 20255791 1e-135
CaES3643 Chr06 5147236 1e-134
CaES3649 Chr06 20224109 1e-130
CaES3667 Chr06 214153681 1e-124
CaES3670 Chr06 105321043 1e-120
CaES3684 Chr06 198040732 1e-143
CaES3712 Chr06 25258446 2e-50
CaES3754 Chr06 106935082 5e-91
CaES3762 Chr06 16920535 1e-132
CaES3765 Chr06 11228386 7e-71
CaES3772 Chr06 5551480 1e-83
CaES3773 Chr06 154481473 1e-127
CaES3785 Chr06 4248781 1e-105
CaES3801 Chr06 12904106 1e-35
CaES3812 Chr06 25672751 1e-144
CaES3829 Chr06 4781911 8e-90
CaES3831 Chr06 20375920 1e-132
CaES3866 Chr06 17087611 7e-93
CaES3907 Chr06 12252282 3e-92
CaES3935 Chr06 5090020 1e-31
CaES3952 Chr06 6343421 3e-84
CaES3988 Chr06 179354010 1e-137
CaES4009 Chr06 44080352 1e-124
CaES4010 Chr06 30134222 1e-115
CaES4084 Chr06 27533538 1e-108
CaES4120 Chr06 217951700 1e-107
CaES4127 Chr06 169098173 1e-126
CaES4129 Chr06 3073346 1e-143
CaES4134 Chr06 169792458 1e-107
CaES4148 Chr06 11821030 1e-121
CaES4171 Chr06 60270016 1e-121
CaES4193 Chr06 2283182 6e-60
CaES4209 Chr06 197314262 5e-76
CaES4212 Chr06 211187153 1e-105
CaES4218 Chr06 3440277 1e-115
CaES4228 Chr06 22133478 1e-107
CaES4233 Chr06 66092007 1e-81
CaES4235 Chr06 3013990 9e-44
CaES4251 Chr06 174555157 2e-91
CaES4254 Chr06 30778240 1e-113
CaES4259 Chr06 90772815 1e-142
CaES4271 Chr06 8801810 2e-78
CaES4293 Chr06 209963338 1e-141
CaES4305 Chr06 7591099 1e-133
CaES4309 Chr06 20699718 1e-87
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum