Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4832 Chr06 47946984 2e-48
CaES1466 Chr06 48214904 1e-111
CaES1653 Chr06 48577531 1e-121
CaES2891 Chr06 48639700 1e-31
CaES2643 Chr06 48940261 1e-117
CaES4372 Chr06 50111570 1e-107
CaES2694 Chr06 50698444 9e-93
CaES0655 Chr06 51690916 1e-106
CaES1154 Chr06 51926614 1e-103
CaES1881 Chr06 53137121 7e-87
CaES2084 Chr06 54030901 1e-133
CaES3121 Chr06 54278806 1e-153
CaES2139 Chr06 55339681 1e-133
CaES0907 Chr06 55981054 1e-121
CaES3639 Chr06 57691248 1e-121
CaES1848 Chr06 58336041 1e-143
CaES1821 Chr06 59164685 8e-71
CaES4171 Chr06 60270016 1e-121
CaES1721 Chr06 60283337 1e-114
CaES0838 Chr06 60915810 5e-82
CaES3160 Chr06 61274532 1e-122
CaES2256 Chr06 63330865 1e-106
CaES4375 Chr06 64221435 1e-139
CaES1101 Chr06 64512733 1e-126
CaES4233 Chr06 66092007 1e-81
CaES1891 Chr06 67340059 5e-54
CaES1521 Chr06 67347901 1e-135
CaES0561 Chr06 70404585 1e-107
CaES0356 Chr06 70918210 1e-117
CaES5236 Chr06 72543966 1e-135
CaES3301 Chr06 72547307 1e-102
CaES2871 Chr06 75932774 1e-116
CaES3119 Chr06 77427834 1e-149
CaES2778 Chr06 79876695 1e-112
CaES2415 Chr06 80211790 1e-114
CaES0146 Chr06 80562792 1e-51
CaES2659 Chr06 80680679 1e-105
CaES4912 Chr06 81150144 1e-105
CaES2662 Chr06 81192850 1e-132
CaES4504 0.0 191 Chr06 81225306 1e-112
CaES5531 Chr06 85801931 2e-63
CaES1231 Chr06 85802000 6e-88
CaES5385 Chr06 88575953 9e-94
CaES5435 Chr06 89069525 4e-97
CaES1811 0.463 166 Chr06 89820526 1e-146
CaES2703 Chr06 90576089 1e-142
CaES4259 Chr06 90772815 1e-142
CaES5201 Chr06 90973537 8e-81
CaES5172 Chr06 91602090 1e-139
CaES0923 Chr06 94665833 1e-134
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum