Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2757 Chr06 32752963 1e-129
CaES2772 Chr06 201144280 1e-108
CaES2774 Chr06 12166213 1e-158
CaES2777 Chr06 115920225 4e-48
CaES2778 Chr06 79876695 1e-112
CaES2813 Chr06 6208794 1e-141
CaES2822 Chr06 9415257 1e-137
CaES2871 Chr06 75932774 1e-116
CaES2874 Chr06 213380412 1e-122
CaES2889 Chr06 10591947 1e-137
CaES2891 Chr06 48639700 1e-31
CaES2896 Chr06 45754398 1e-160
CaES2921 Chr06 198014004 6e-96
CaES2931 Chr06 123773697 1e-130
CaES2948 Chr06 11189431 3e-99
CaES2993 Chr06 193678412 2e-27
CaES3004 Chr06 216640475 1e-151
CaES3032 Chr06 163055421 1e-110
CaES3048 Chr06 103735732 1e-102
CaES3052 Chr06 19261391 1e-137
CaES3053 Chr06 3101139 4e-58
CaES3060 Chr06 112866250 1e-103
CaES3064 Chr06 20362303 5e-57
CaES3074 Chr06 210813589 1e-127
CaES3093 Chr06 29740666 1e-123
CaES3104 Chr06 8840832 1e-83
CaES3108 Chr06 25264821 6e-79
CaES3119 Chr06 77427834 1e-149
CaES3121 Chr06 54278806 1e-153
CaES3122 Chr06 5090536 6e-46
CaES3160 Chr06 61274532 1e-122
CaES3162 Chr06 3916852 1e-139
CaES3192 Chr06 6471738 3e-29
CaES3206 Chr06 25126364 1e-122
CaES3215 Chr06 44877523 4e-60
CaES3218 Chr06 20212181 1e-148
CaES3220 Chr06 192025522 1e-113
CaES3246 Chr06 23147806 8e-55
CaES3276 Chr06 213355792 1e-143
CaES3284 Chr06 25126927 1e-100
CaES3290 Chr06 130900766 2e-65
CaES3299 Chr06 336484 1e-52
CaES3301 Chr06 72547307 1e-102
CaES3304 Chr06 37486336 2e-66
CaES3412 Chr06 26272954 1e-132
CaES3416 Chr06 15408329 5e-67
CaES3439 Chr06 27994486 1e-153
CaES3473 Chr06 213340759 1e-108
CaES3516 Chr06 6250303 1e-137
CaES3570 Chr06 170345273 2e-86
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum