Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1631 Chr06 27753056 1e-59
CaES0995 Chr06 27763928 1e-108
CaES3439 Chr06 27994486 1e-153
CaES2321 Chr06 28439769 1e-136
CaES1299 Chr06 28646472 1e-147
CaES5687 Chr06 29241293 1e-143
CaES3093 Chr06 29740666 1e-123
CaES0899 Chr06 30091429 1e-100
CaES4010 Chr06 30134222 1e-115
CaES5387 Chr06 30249942 7e-32
CaES0844 Chr06 30468774 2e-49
CaES1762 Chr06 30514494 1e-102
CaES4254 Chr06 30778240 1e-113
CaES2484 Chr06 30880140 4e-57
CaES1941 Chr06 30890581 1e-120
CaES2041 Chr06 31529719 1e-147
CaES4599 Chr06 31615558 2e-90
CaES1634 Chr06 31687628 6e-94
CaES5065 Chr06 32102562 1e-124
CaES2475 Chr06 32750554 2e-71
CaES2757 Chr06 32752963 1e-129
CaES0197 Chr06 33156421 2e-86
CaES0237 Chr06 33350788 1e-118
CaES0349 Chr06 33527180 1e-101
CaES2186 Chr06 35454772 1e-110
CaES5368 Chr06 35623020 5e-83
CaES4783 Chr06 36555629 1e-120
CaES2030 Chr06 37290530 1e-138
CaES1714 Chr06 37456299 1e-120
CaES4723 Chr06 37456504 1e-40
CaES3304 Chr06 37486336 2e-66
CaES4382 Chr06 37661191 1e-138
CaES1063 Chr06 37696594 7e-98
CaES4854 Chr06 38080525 1e-122
CaES4624 Chr06 38167207 1e-125
CaES4570 Chr06 38202297 1e-121
CaES0634 Chr06 38928583 1e-108
CaES2378 Chr06 39079176 1e-92
CaES0137 Chr06 40535010 1e-129
CaES1414 Chr06 41145029 3e-86
CaES5560 Chr06 41147339 3e-48
CaES0830 Chr06 43145893 4e-58
CaES4009 Chr06 44080352 1e-124
CaES1160 Chr06 44344306 1e-120
CaES3215 Chr06 44877523 4e-60
CaES2896 Chr06 45754398 1e-160
CaES2327 Chr06 46963202 1e-105
CaES0715 Chr06 47023389 1e-127
CaES1728 Chr06 47536314 7e-60
CaES4529 Chr06 47812936 7e-80
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum