Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1466 Chr06 48214904 1e-111
CaES1486 Chr06 218100754 1e-150
CaES1516 Chr06 16883781 2e-70
CaES1518 Chr06 14244727 2e-86
CaES1521 Chr06 67347901 1e-135
CaES1525 Chr06 9408381 3e-87
CaES1530 Chr06 5816861 1e-106
CaES1568 Chr06 12291727 2e-31
CaES1571 Chr06 12953878 3e-39
CaES1591 Chr06 2673031 2e-58
CaES1631 Chr06 27753056 1e-59
CaES1634 Chr06 31687628 6e-94
CaES1641 Chr06 9260030 5e-70
CaES1651 Chr06 115224474 1e-120
CaES1653 Chr06 48577531 1e-121
CaES1671 Chr06 2417134 1e-71
CaES1682 Chr06 11543060 9e-81
CaES1692 Chr06 22118247 1e-106
CaES1701 Chr06 168968804 1e-114
CaES1714 Chr06 37456299 1e-120
CaES1721 Chr06 60283337 1e-114
CaES1724 Chr06 22130177 3e-80
CaES1728 Chr06 47536314 7e-60
CaES1732 Chr06 6645618 1e-69
CaES1762 Chr06 30514494 1e-102
CaES1780 Chr06 16582279 1e-121
CaES1790 Chr06 223963 5e-46
CaES1797 Chr06 185315961 1e-95
CaES1798 Chr06 135344905 8e-76
CaES1802 Chr06 23230709 1e-135
CaES1811 0.463 166 Chr06 89820526 1e-146
CaES1821 Chr06 59164685 8e-71
CaES1829 Chr06 10275325 1e-126
CaES1848 Chr06 58336041 1e-143
CaES1864 Chr06 9491371 1e-144
CaES1865 Chr06 216461963 1e-119
CaES1866 Chr06 13363871 1e-110
CaES1873 Chr06 218483521 1e-28
CaES1880 Chr06 9492257 2e-64
CaES1881 Chr06 53137121 7e-87
CaES1891 Chr06 67340059 5e-54
CaES1906 Chr06 65532 1e-117
CaES1911 0.0 190 Chr06 1951592 1e-140
CaES1921 Chr06 4415923 1e-134
CaES1941 Chr06 30890581 1e-120
CaES1957 Chr06 1853135 1e-109
CaES1961 Chr06 4039040 2e-88
CaES2013 Chr06 1340903 1e-130
CaES2030 Chr06 37290530 1e-138
CaES2041 Chr06 31529719 1e-147
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum