Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2161 Chr06 10118852 3e-74
CaES4964 Chr06 10220167 1e-137
CaES1829 Chr06 10275325 1e-126
CaES3613 Chr06 10288868 1e-120
CaES2889 Chr06 10591947 1e-137
CaES4758 Chr06 10592517 1e-133
CaES2948 Chr06 11189431 3e-99
CaES0060 Chr06 11210368 9e-90
CaES3765 Chr06 11228386 7e-71
CaES4554 Chr06 11229961 3e-95
CaES0766 Chr06 11274508 1e-166
CaES0508 Chr06 11315561 1e-107
CaES1682 Chr06 11543060 9e-81
CaES0897 Chr06 11612210 1e-108
CaES1096 Chr06 11721734 1e-138
CaES4148 Chr06 11821030 1e-121
CaES5504 Chr06 11864469 4e-91
CaES0934 Chr06 12047300 1e-124
CaES2774 Chr06 12166213 1e-158
CaES3907 Chr06 12252282 3e-92
CaES1568 Chr06 12291727 2e-31
CaES5271 Chr06 12372005 9e-86
CaES0499 Chr06 12463931 1e-29
CaES2147 Chr06 12491782 1e-71
CaES3801 Chr06 12904106 1e-35
CaES1571 Chr06 12953878 3e-39
CaES5405 Chr06 13023033 4e-71
CaES2644 Chr06 13024909 1e-122
CaES5077 Chr06 13082962 2e-82
CaES5243 Chr06 13235246 3e-72
CaES1866 Chr06 13363871 1e-110
CaES1355 Chr06 13390090 8e-48
CaES5722 Chr06 13483823 2e-81
CaES1518 Chr06 14244727 2e-86
CaES5715 Chr06 15338332 5e-95
CaES3416 Chr06 15408329 5e-67
CaES1072 Chr06 16320816 1e-139
CaES0118 Chr06 16475130 1e-111
CaES1780 Chr06 16582279 1e-121
CaES4911 Chr06 16671122 1e-108
CaES5732 Chr06 16863471 3e-51
CaES2269 Chr06 16863546 1e-102
CaES0247 Chr06 16868681 1e-120
CaES2385 Chr06 16874839 1e-133
CaES1516 Chr06 16883781 2e-70
CaES3762 Chr06 16920535 1e-132
CaES4325 Chr06 16967222 4e-95
CaES2686 Chr06 16996029 1e-119
CaES3866 Chr06 17087611 7e-93
CaES5730 Chr06 17087968 5e-90
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum