Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0809 Chr06 183073923 1e-116
CaES0830 Chr06 43145893 4e-58
CaES0833 Chr06 3078065 7e-45
CaES0838 Chr06 60915810 5e-82
CaES0844 Chr06 30468774 2e-49
CaES0862 Chr06 213981173 1e-79
CaES0865 Chr06 159796775 1e-103
CaES0867 Chr06 218579430 7e-31
CaES0897 Chr06 11612210 1e-108
CaES0899 Chr06 30091429 1e-100
CaES0903 Chr06 143632106 1e-103
CaES0907 Chr06 55981054 1e-121
CaES0923 Chr06 94665833 1e-134
CaES0932 Chr06 9491605 1e-137
CaES0934 Chr06 12047300 1e-124
CaES0945 Chr06 102098583 1e-118
CaES0963 Chr06 210585648 7e-82
CaES0995 Chr06 27763928 1e-108
CaES1010 Chr06 170760056 1e-38
CaES1024 Chr06 193426783 1e-72
CaES1039 Chr06 211293177 1e-117
CaES1044 Chr06 95404077 1e-136
CaES1063 Chr06 37696594 7e-98
CaES1072 Chr06 16320816 1e-139
CaES1096 Chr06 11721734 1e-138
CaES1101 Chr06 64512733 1e-126
CaES1103 Chr06 159294905 1e-114
CaES1128 Chr06 20341090 1e-144
CaES1154 Chr06 51926614 1e-103
CaES1160 Chr06 44344306 1e-120
CaES1181 Chr06 7007690 1e-26
CaES1215 Chr06 112865576 1e-124
CaES1216 Chr06 115933042 1e-49
CaES1221 Chr06 1690673 1e-113
CaES1231 Chr06 85802000 6e-88
CaES1267 Chr06 133763769 1e-134
CaES1278 Chr06 4627370 1e-76
CaES1284 Chr06 19032448 1e-120
CaES1297 Chr06 20435950 1e-153
CaES1299 Chr06 28646472 1e-147
CaES1326 Chr06 9473401 1e-121
CaES1342 Chr06 3022865 1e-115
CaES1355 Chr06 13390090 8e-48
CaES1360 Chr06 132415319 1e-91
CaES1380 Chr06 159475 3e-47
CaES1393 Chr06 26090609 1e-100
CaES1403 Chr06 148502564 1e-133
CaES1411 Chr06 216115955 2e-85
CaES1414 Chr06 41145029 3e-86
CaES1463 Chr06 165029200 1e-121
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum