Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0719 Chr06 4420209 1e-120
CaES1278 Chr06 4627370 1e-76
CaES5205 Chr06 4627394 6e-84
CaES0592 Chr06 4772227 1e-107
CaES3829 Chr06 4781911 8e-90
CaES0036 Chr06 4873541 1e-128
CaES5184 Chr06 4875512 1e-134
CaES3935 Chr06 5090020 1e-31
CaES3122 Chr06 5090536 6e-46
CaES3643 Chr06 5147236 1e-134
CaES5723 Chr06 5273770 1e-108
CaES0680 Chr06 5436033 1e-122
CaES3772 Chr06 5551480 1e-83
CaES2202 Chr06 5567291 5e-96
CaES1530 Chr06 5816861 1e-106
CaES2813 Chr06 6208794 1e-141
CaES3516 Chr06 6250303 1e-137
CaES3952 Chr06 6343421 3e-84
CaES3192 Chr06 6471738 3e-29
CaES1732 Chr06 6645618 1e-69
CaES4825 Chr06 6678729 3e-96
CaES1181 Chr06 7007690 1e-26
CaES0333 Chr06 7100530 1e-114
CaES0304 Chr06 7206685 1e-111
CaES4305 Chr06 7591099 1e-133
CaES5403 Chr06 7832397 5e-60
CaES2517 Chr06 8019100 2e-66
CaES0401 Chr06 8474894 1e-113
CaES5020 Chr06 8611997 1e-168
CaES4271 Chr06 8801810 2e-78
CaES3104 Chr06 8840832 1e-83
CaES2494 Chr06 9086990 2e-34
CaES0165 Chr06 9225524 8e-72
CaES1641 Chr06 9260030 5e-70
CaES5409 Chr06 9287130 5e-87
CaES2337 Chr06 9403023 2e-66
CaES1525 Chr06 9408381 3e-87
CaES2822 Chr06 9415257 1e-137
CaES1326 Chr06 9473401 1e-121
CaES5238 Chr06 9491306 1e-126
CaES1864 Chr06 9491371 1e-144
CaES0932 Chr06 9491605 1e-137
CaES1880 Chr06 9492257 2e-64
CaES2279 Chr06 9513362 1e-126
CaES2556 Chr06 9513620 1e-122
CaES5270 Chr06 9662577 5e-80
CaES5676 Chr06 9687933 2e-70
CaES2317 Chr06 9809760 1e-114
CaES5591 Chr06 9818912 5e-96
CaES4538 Chr06 10100662 1e-106
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum