Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4495 Chr05 37157937 1e-111
CaES4537 Chr05 2917900 8e-88
CaES4548 Chr05 112175034 1e-87
CaES4569 Chr05 14620574 1e-108
CaES4573 Chr05 216538655 7e-35
CaES4586 Chr05 174325869 1e-157
CaES4590 Chr05 217120271 1e-144
CaES4610 Chr05 30506547 1e-154
CaES4633 Chr05 29101797 1e-110
CaES4667 Chr05 7192295 1e-116
CaES4693 Chr05 200902537 1e-59
CaES4705 Chr05 76511629 1e-124
CaES4737 Chr05 67319980 5e-86
CaES4752 Chr05 35497151 4e-26
CaES4790 Chr05 25810273 1e-137
CaES4813 Chr05 217200882 1e-116
CaES4844 Chr05 643693 1e-87
CaES4884 Chr05 200497645 1e-59
CaES4901 Chr05 926202 1e-116
CaES4909 Chr05 162680434 1e-118
CaES4940 Chr05 198906483 1e-115
CaES4945 Chr05 192023344 3e-78
CaES4956 Chr05 161283548 1e-121
CaES4961 Chr05 32818924 1e-133
CaES4971 Chr05 31864216 1e-116
CaES4983 Chr05 173931507 1e-151
CaES4998 Chr05 214550539 2e-81
CaES5003 Chr05 13654088 1e-131
CaES5005 Chr05 897689 1e-138
CaES5011 Chr05 206640218 1e-92
CaES5025 Chr05 156039679 1e-100
CaES5051 Chr05 148596079 1e-119
CaES5067 Chr05 40904231 1e-113
CaES5099 Chr05 205816739 1e-140
CaES5123 Chr05 7611903 3e-84
CaES5127 Chr05 204734071 1e-129
CaES5145 Chr05 147279274 1e-134
CaES5148 Chr05 30429826 1e-127
CaES5237 Chr05 1586506 6e-76
CaES5284 Chr05 73371870 1e-132
CaES5294 Chr05 179943184 1e-138
CaES5308 Chr05 901330 8e-96
CaES5315 Chr05 205017275 4e-73
CaES5316 Chr05 207626768 1e-57
CaES5332 Chr05 28226192 2e-22
CaES5338 Chr05 51878656 5e-76
CaES5358 Chr05 191266800 4e-88
CaES5365 Chr05 1914397 1e-102
CaES5371 Chr05 175817524 1e-55
CaES5396 Chr05 214488835 4e-84
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312

MarkerDB | Capsicum annuum