Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3268 Chr05 199290606 1e-123
CaES3271 Chr05 214470413 1e-100
CaES3308 Chr05 10099636 2e-22
CaES3348 Chr05 214447486 7e-63
CaES3365 Chr05 200900276 7e-89
CaES3371 Chr05 215464319 1e-74
CaES3374 Chr05 52448869 1e-110
CaES3401 Chr05 198349206 1e-117
CaES3425 Chr05 20429216 1e-137
CaES3438 Chr05 9338147 1e-144
CaES3447 0.0 192 Chr05 84991656 1e-149
CaES3466 Chr05 206380969 1e-135
CaES3470 Chr05 158547932 1e-120
CaES3481 Chr05 49815219 1e-125
CaES3506 Chr05 146380265 1e-134
CaES3524 0.0 192 Chr05 120996 1e-127
CaES3525 Chr05 1893136 1e-107
CaES3577 Chr05 130161956 1e-105
CaES3592 Chr05 28107823 1e-130
CaES3606 Chr05 168340285 1e-136
CaES3668 Chr05 8872719 1e-135
CaES3688 Chr05 216868909 2e-92
CaES3694 Chr05 29795408 1e-136
CaES3804 Chr05 156265392 1e-116
CaES3809 Chr05 176156080 1e-75
CaES3826 Chr05 129771662 1e-105
CaES3833 Chr05 2749645 1e-90
CaES3841 Chr05 36974266 5e-93
CaES3845 Chr05 156125707 4e-64
CaES3893 Chr05 78006741 1e-134
CaES3933 Chr05 215968139 1e-139
CaES3979 Chr05 173244020 1e-122
CaES3990 Chr05 63901613 1e-122
CaES3991 Chr05 30841500 1e-124
CaES4013 Chr05 2798111 1e-118
CaES4044 Chr05 164132655 1e-118
CaES4078 Chr05 15232698 3e-88
CaES4118 Chr05 162674646 2e-90
CaES4161 Chr05 63493193 1e-119
CaES4184 Chr05 172600776 1e-129
CaES4196 Chr05 157426301 1e-109
CaES4231 Chr05 206537536 1e-121
CaES4241 Chr05 825514 1e-112
CaES4262 Chr05 6908741 1e-128
CaES4300 Chr05 87806765 1e-109
CaES4353 Chr05 217194968 1e-107
CaES4388 Chr05 189444126 1e-118
CaES4407 Chr05 217061535 1e-137
CaES4436 Chr05 183553537 1e-71
CaES4481 Chr05 89987388 6e-85
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312

MarkerDB | Capsicum annuum