Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2440 Chr05 2743599 1e-118
CaES2459 Chr05 49845200 1e-105
CaES2462 Chr05 130811749 4e-79
CaES2472 Chr05 202346119 1e-95
CaES2491 Chr05 157426301 2e-39
CaES2507 Chr05 215203473 6e-62
CaES2539 Chr05 2646426 7e-40
CaES2545 Chr05 7611903 3e-53
CaES2562 Chr05 97568328 5e-85
CaES2565 Chr05 942938 7e-87
CaES2603 Chr05 206435363 1e-142
CaES2615 Chr05 16565738 2e-47
CaES2630 Chr05 205877906 1e-146
CaES2639 Chr05 191213462 7e-91
CaES2642 Chr05 216314859 1e-101
CaES2654 Chr05 37159058 3e-61
CaES2677 Chr05 193394356 1e-137
CaES2685 Chr05 158980992 1e-104
CaES2728 Chr05 8582489 1e-75
CaES2763 Chr05 5990578 1e-128
CaES2797 Chr05 189462598 4e-92
CaES2832 Chr05 206465668 1e-122
CaES2850 Chr05 15232629 2e-54
CaES2851 Chr05 164116493 1e-132
CaES2854 0.0 190 Chr05 131540388 1e-156
CaES2860 Chr05 3318933 9e-72
CaES2872 Chr05 169357539 2e-94
CaES2908 Chr05 214446857 1e-103
CaES2909 Chr05 106521542 1e-113
CaES2929 Chr05 103326962 1e-129
CaES2939 Chr05 84628667 1e-125
CaES2954 Chr05 183400647 2e-98
CaES2966 Chr05 67448430 6e-89
CaES2994 Chr05 68161845 1e-149
CaES3002 Chr05 12281801 1e-139
CaES3007 Chr05 118785015 1e-107
CaES3020 Chr05 29797147 1e-130
CaES3049 Chr05 22060390 1e-144
CaES3055 Chr05 120043644 3e-96
CaES3067 Chr05 1469014 1e-113
CaES3075 Chr05 30420743 1e-117
CaES3080 Chr05 84975241 1e-127
CaES3089 Chr05 209436351 7e-82
CaES3125 Chr05 43470529 1e-122
CaES3154 Chr05 839334 1e-141
CaES3177 Chr05 13704853 1e-83
CaES3188 Chr05 133240620 1e-139
CaES3205 Chr05 8819192 1e-155
CaES3233 Chr05 95381985 1e-142
CaES3257 Chr05 202975532 1e-123
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312

MarkerDB | Capsicum annuum