Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES5648 Chr05 87608977 6e-79
CaES0792 Chr05 87612506 3e-29
CaES0007 Chr05 87612851 1e-105
CaES4300 Chr05 87806765 1e-109
CaES4481 Chr05 89987388 6e-85
CaES3233 Chr05 95381985 1e-142
CaES2562 Chr05 97568328 5e-85
CaES2929 Chr05 103326962 1e-129
CaES2909 Chr05 106521542 1e-113
CaES1454 Chr05 111690996 9e-95
CaES4548 Chr05 112175034 1e-87
CaES3007 Chr05 118785015 1e-107
CaES3055 Chr05 120043644 3e-96
CaES1379 Chr05 124443602 1e-84
CaES3826 Chr05 129771662 1e-105
CaES0816 Chr05 129817159 1e-95
CaES0988 Chr05 130158056 1e-100
CaES3577 Chr05 130161956 1e-105
CaES1574 Chr05 130224353 1e-98
CaES2462 Chr05 130811749 4e-79
CaES2854 0.0 190 Chr05 131540388 1e-156
CaES3188 Chr05 133240620 1e-139
CaES1498 Chr05 144744369 5e-37
CaES3506 Chr05 146380265 1e-134
CaES5145 Chr05 147279274 1e-134
CaES5051 Chr05 148596079 1e-119
CaES0905 Chr05 151267696 1e-137
CaES2002 Chr05 154667615 3e-93
CaES5025 Chr05 156039679 1e-100
CaES2314 Chr05 156124746 1e-68
CaES3845 Chr05 156125707 4e-64
CaES3804 Chr05 156265392 1e-116
CaES2491 Chr05 157426301 2e-39
CaES4196 Chr05 157426301 1e-109
CaES3470 Chr05 158547932 1e-120
CaES1374 Chr05 158700172 1e-144
CaES2685 Chr05 158980992 1e-104
CaES4956 Chr05 161283548 1e-121
CaES4118 Chr05 162674646 2e-90
CaES4909 Chr05 162680434 1e-118
CaES2851 Chr05 164116493 1e-132
CaES4044 Chr05 164132655 1e-118
CaES1546 Chr05 168274967 2e-47
CaES2189 Chr05 168339712 1e-127
CaES3606 Chr05 168340285 1e-136
CaES1654 Chr05 169103781 8e-49
CaES1981 Chr05 169159294 1e-133
CaES2872 Chr05 169357539 2e-94
CaES0524 Chr05 169683838 1e-117
CaES0269 Chr05 171346470 1e-109
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312


MarkerDB | Capsicum annuum