Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1704 Chr05 175991706 8e-95
CaES1708 Chr05 81678552 1e-118
CaES1709 Chr05 796019 8e-55
CaES1712 Chr05 13202190 1e-86
CaES1738 Chr05 193278029 1e-143
CaES1756 Chr05 45316627 1e-134
CaES1758 Chr05 6636743 1e-100
CaES1784 Chr05 175981496 3e-68
CaES1786 Chr05 21868181 8e-27
CaES1815 Chr05 13173672 1e-136
CaES1834 Chr05 176115313 1e-118
CaES1844 Chr05 187946332 5e-97
CaES1855 Chr05 7297405 1e-111
CaES1857 Chr05 53288001 1e-105
CaES1859 Chr05 175991904 1e-148
CaES1896 Chr05 1485457 1e-130
CaES1910 Chr05 173492219 1e-122
CaES1918 Chr05 214952695 1e-111
CaES1939 Chr05 202944772 1e-122
CaES1981 Chr05 169159294 1e-133
CaES1986 Chr05 206242291 1e-101
CaES1987 Chr05 30411820 9e-96
CaES2002 Chr05 154667615 3e-93
CaES2010 Chr05 129023 1e-151
CaES2012 Chr05 5512600 1e-153
CaES2043 Chr05 1714220 4e-74
CaES2044 Chr05 10273752 6e-42
CaES2057 Chr05 205877941 1e-167
CaES2069 Chr05 6746486 1e-98
CaES2071 Chr05 201120630 1e-105
CaES2085 Chr05 13674216 8e-89
CaES2089 Chr05 194738840 1e-121
CaES2097 Chr05 202757326 1e-119
CaES2115 Chr05 198906067 1e-133
CaES2135 Chr05 566544 1e-137
CaES2184 Chr05 175245392 1e-100
CaES2189 Chr05 168339712 1e-127
CaES2192 Chr05 3196790 1e-134
CaES2209 Chr05 12816526 1e-101
CaES2244 Chr05 9497153 3e-66
CaES2295 Chr05 9666494 1e-132
CaES2304 Chr05 10042951 1e-82
CaES2305 Chr05 216259967 4e-84
CaES2314 Chr05 156124746 1e-68
CaES2332 0.476 192 Chr05 570508 1e-137
CaES2360 Chr05 617719 5e-60
CaES2379 Chr05 208949563 1e-49
CaES2384 Chr05 7797514 5e-60
CaES2400 Chr05 204663372 2e-98
CaES2426 Chr05 200423907 7e-90
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312

MarkerDB | Capsicum annuum