Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES5332 Chr05 28226192 2e-22
CaES1330 Chr05 28543582 1e-121
CaES4633 Chr05 29101797 1e-110
CaES3694 Chr05 29795408 1e-136
CaES0960 Chr05 29795969 1e-26
CaES3020 Chr05 29797147 1e-130
CaES1987 Chr05 30411820 9e-96
CaES3075 Chr05 30420743 1e-117
CaES5148 Chr05 30429826 1e-127
CaES4610 Chr05 30506547 1e-154
CaES3991 Chr05 30841500 1e-124
CaES1020 Chr05 31130747 9e-57
CaES0930 Chr05 31466509 1e-145
CaES1542 Chr05 31554438 7e-44
CaES4971 Chr05 31864216 1e-116
CaES0875 Chr05 32031657 1e-100
CaES4961 Chr05 32818924 1e-133
CaES0626 Chr05 34278257 1e-116
CaES4752 Chr05 35497151 4e-26
CaES3841 Chr05 36974266 5e-93
CaES0845 Chr05 36974451 1e-79
CaES4495 Chr05 37157937 1e-111
CaES2654 Chr05 37159058 3e-61
CaES5067 Chr05 40904231 1e-113
CaES3125 Chr05 43470529 1e-122
CaES1756 Chr05 45316627 1e-134
CaES3481 Chr05 49815219 1e-125
CaES2459 Chr05 49845200 1e-105
CaES5338 Chr05 51878656 5e-76
CaES3374 Chr05 52448869 1e-110
CaES1857 Chr05 53288001 1e-105
CaES0994 Chr05 59272178 1e-107
CaES4161 Chr05 63493193 1e-119
CaES3990 Chr05 63901613 1e-122
CaES0069 Chr05 64832570 5e-69
CaES4737 Chr05 67319980 5e-86
CaES2966 Chr05 67448430 6e-89
CaES2994 Chr05 68161845 1e-149
CaES0551 Chr05 72510627 4e-70
CaES1399 Chr05 72510765 2e-86
CaES5284 Chr05 73371870 1e-132
CaES0658 Chr05 73863751 1e-135
CaES4705 Chr05 76511629 1e-124
CaES3893 Chr05 78006741 1e-134
CaES1308 Chr05 80522775 1e-133
CaES1708 Chr05 81678552 1e-118
CaES5669 Chr05 81680038 3e-89
CaES2939 Chr05 84628667 1e-125
CaES3080 Chr05 84975241 1e-127
CaES3447 0.0 192 Chr05 84991656 1e-149
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312


MarkerDB | Capsicum annuum