Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0562 Chr05 7151678 1e-64
CaES4667 Chr05 7192295 1e-116
CaES0231 Chr05 7264985 1e-150
CaES1855 Chr05 7297405 1e-111
CaES1079 Chr05 7450200 3e-45
CaES5123 Chr05 7611903 3e-84
CaES2545 Chr05 7611903 3e-53
CaES0605 Chr05 7669128 6e-34
CaES2384 Chr05 7797514 5e-60
CaES2728 Chr05 8582489 1e-75
CaES1576 Chr05 8717322 2e-25
CaES3205 Chr05 8819192 1e-155
CaES3668 Chr05 8872719 1e-135
CaES5602 Chr05 8872770 1e-125
CaES3438 Chr05 9338147 1e-144
CaES1405 Chr05 9472561 3e-69
CaES2244 Chr05 9497153 3e-66
CaES0248 Chr05 9534870 1e-85
CaES2295 Chr05 9666494 1e-132
CaES0083 Chr05 9734138 1e-78
CaES2304 Chr05 10042951 1e-82
CaES3308 Chr05 10099636 2e-22
CaES2044 Chr05 10273752 6e-42
CaES5613 Chr05 10735880 1e-137
CaES3002 Chr05 12281801 1e-139
CaES0534 Chr05 12496956 4e-67
CaES2209 Chr05 12816526 1e-101
CaES1815 Chr05 13173672 1e-136
CaES1150 Chr05 13202190 1e-104
CaES0357 Chr05 13202190 2e-88
CaES1712 Chr05 13202190 1e-86
CaES5003 Chr05 13654088 1e-131
CaES2085 Chr05 13674216 8e-89
CaES3177 Chr05 13704853 1e-83
CaES0446 Chr05 14523644 1e-85
CaES4569 Chr05 14620574 1e-108
CaES2850 Chr05 15232629 2e-54
CaES4078 Chr05 15232698 3e-88
CaES1629 Chr05 15639907 1e-123
CaES0214 Chr05 15871804 2e-30
CaES2615 Chr05 16565738 2e-47
CaES0010 Chr05 19370635 1e-80
CaES3425 Chr05 20429216 1e-137
CaES1786 Chr05 21868181 8e-27
CaES1230 Chr05 21883716 5e-53
CaES3049 Chr05 22060390 1e-144
CaES1106 Chr05 22424332 1e-130
CaES0933 Chr05 22547913 1e-121
CaES1627 Chr05 25159563 1e-105
CaES1436 Chr05 25682115 1e-139
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312


MarkerDB | Capsicum annuum