Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0905 Chr05 151267696 1e-137
CaES0906 Chr05 192077452 1e-105
CaES0914 Chr05 1482055 1e-120
CaES0930 Chr05 31466509 1e-145
CaES0933 Chr05 22547913 1e-121
CaES0960 Chr05 29795969 1e-26
CaES0965 Chr05 191487719 1e-120
CaES0987 Chr05 216994682 1e-113
CaES0988 Chr05 130158056 1e-100
CaES0994 Chr05 59272178 1e-107
CaES1007 Chr05 217051319 3e-28
CaES1009 Chr05 193371029 1e-103
CaES1020 Chr05 31130747 9e-57
CaES1059 Chr05 178351064 2e-87
CaES1078 Chr05 209147646 7e-98
CaES1079 Chr05 7450200 3e-45
CaES1093 Chr05 216967862 1e-113
CaES1106 Chr05 22424332 1e-130
CaES1150 Chr05 13202190 1e-104
CaES1163 Chr05 216526446 1e-123
CaES1176 Chr05 193370563 1e-110
CaES1230 Chr05 21883716 5e-53
CaES1248 Chr05 187793838 1e-155
CaES1266 Chr05 215215284 3e-88
CaES1286 Chr05 2185197 1e-126
CaES1308 Chr05 80522775 1e-133
CaES1330 Chr05 28543582 1e-121
CaES1358 Chr05 2145218 1e-139
CaES1369 Chr05 210956453 1e-108
CaES1374 Chr05 158700172 1e-144
CaES1379 Chr05 124443602 1e-84
CaES1399 Chr05 72510765 2e-86
CaES1400 Chr05 183398025 1e-122
CaES1405 Chr05 9472561 3e-69
CaES1436 Chr05 25682115 1e-139
CaES1449 Chr05 214920938 1e-110
CaES1454 Chr05 111690996 9e-95
CaES1470 Chr05 202771818 3e-46
CaES1498 Chr05 144744369 5e-37
CaES1534 Chr05 184534312 3e-74
CaES1542 Chr05 31554438 7e-44
CaES1546 Chr05 168274967 2e-47
CaES1550 Chr05 194674705 3e-75
CaES1574 Chr05 130224353 1e-98
CaES1576 Chr05 8717322 2e-25
CaES1627 Chr05 25159563 1e-105
CaES1629 Chr05 15639907 1e-123
CaES1635 Chr05 202841708 3e-59
CaES1654 Chr05 169103781 8e-49
CaES1676 Chr05 6370571 1e-100
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312

MarkerDB | Capsicum annuum