Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4914 Chr04 30729613 1e-138
CaES4921 Chr04 2192287 4e-59
CaES4932 Chr04 18462473 1e-131
CaES4934 Chr04 196435808 1e-126
CaES4947 Chr04 4698213 8e-85
CaES4952 Chr04 134975286 7e-91
CaES4974 Chr04 174187966 1e-148
CaES4989 Chr04 199804949 1e-125
CaES4992 Chr04 2431682 5e-62
CaES5022 Chr04 90388506 1e-145
CaES5026 Chr04 205528805 1e-141
CaES5046 Chr04 7343508 1e-45
CaES5050 Chr04 198804577 1e-139
CaES5057 Chr04 44132333 1e-105
CaES5062 Chr04 69533622 1e-108
CaES5063 Chr04 31345343 1e-124
CaES5068 Chr04 1322104 1e-79
CaES5089 Chr04 139660600 1e-128
CaES5102 Chr04 37748992 1e-85
CaES5112 Chr04 7896182 1e-90
CaES5124 Chr04 132360800 1e-88
CaES5126 Chr04 7896182 1e-113
CaES5130 Chr04 74706462 1e-155
CaES5135 Chr04 10335664 1e-106
CaES5144 Chr04 161542864 1e-85
CaES5170 Chr04 42148504 1e-64
CaES5173 Chr04 58643631 1e-133
CaES5183 0.0 192 Chr04 87564074 1e-151
CaES5188 Chr04 11722382 5e-88
CaES5196 Chr04 42616312 1e-132
CaES5199 Chr04 8634676 4e-91
CaES5202 Chr04 17201357 1e-119
CaES5245 Chr04 18463163 5e-78
CaES5252 Chr04 97275443 1e-89
CaES5255 Chr04 145787488 1e-97
CaES5257 Chr04 22058566 2e-57
CaES5277 Chr04 121613029 3e-85
CaES5311 Chr04 24415542 2e-79
CaES5322 Chr04 145173955 1e-93
CaES5337 Chr04 25997296 1e-106
CaES5362 Chr04 136625549 1e-127
CaES5406 Chr04 17465070 1e-54
CaES5410 Chr04 43074408 6e-34
CaES5425 Chr04 157078930 7e-50
CaES5452 Chr04 201788679 8e-40
CaES5475 Chr04 2051966 6e-54
CaES5480 Chr04 13899744 6e-57
CaES5498 Chr04 49115188 2e-26
CaES5502 Chr04 172878415 9e-91
CaES5513 Chr04 184750786 6e-40
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360

MarkerDB | Capsicum annuum